Gossypium hirsutum (upland cotton): 107912674
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Entry
107912674 CDS
T04793
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107912674
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
107912674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRF2-like_C_cyclin_rpt
Zn_Ribbon_TF
AKAP28
Motif
Other DBs
NCBI-GeneID:
107912674
NCBI-ProteinID:
XP_016696454
UniProt:
A0A1U8K751
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All DBs
Position
D11:17553121..17555049
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AA seq
526 aa
AA seq
DB search
MPCRCGSHSTIRDDQTGNLVCSKCYTILDFDNYEAQIGGITGPTGTNIHIGYAGTGSCIS
YKDRKIYQAKTLIHQYALRLDITYSESGITSMIEEITDGEFGEGDWFNVLIGACSYVVMR
RDKKFFPAAEIAKAVGCDIYELGRMIARVVKFLKLSLPEISIAGLFEREFNNYMNRKNVD
EDKKEMMMKQGMFLVNCAVKWSLTTGRRPLPVVAAVMAFVAELNGVDGLKIEDVAEHVHA
VVSTCKLRYKELLAALVRVAQVLPWGKDISVKNVVKYAPFVIQYMELKSMEVPGGGGERV
EPFDMEDVISECLQKVAAYGNDENLSNGDSQYFEVRNRSDFPTLSNDNDGNNLKLSHECL
SLIYSTFSNEVDAEKLNGQSGQIHVRKRWGLEPYAYQDWWSGKSELSKKLLLKQILEKEV
GFDMMPPSFIAGCKANERRRQKINAAKVRINKIMDPSYAGSDGSDNLNSSEVACGGKKRK
RRQASEIDWEDFVIEALLLHRVKEEDIEKGHYRALLGLYVFNSGTI
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgtagatgcggaagtcattcgaccattcgcgacgaccagacgggcaacctcgtt
tgctccaaatgctacaccatcctcgatttcgacaactacgaagcccaaatcggcggcatc
accggtcccacaggcaccaatatccacatcggctacgcaggtaccggttcttgcatctct
tacaaagacaggaaaatctaccaagccaaaaccttaatccaccaatacgccttgaggctt
gacataacttattctgaaagcggcattacttctatgatcgaggagatcaccgatggggaa
ttcggtgaaggcgattggtttaatgttctaatcggtgcttgttcttatgttgttatgagg
agagacaagaagttttttcccgccgccgagattgccaaggctgttggttgtgatatttat
gaattaggtaggatgattgctcgtgtcgttaagtttctgaaattgagtttgcctgagatt
agtatcgccggtttgtttgaaagagaattcaataattatatgaataggaaaaatgtggat
gaggataagaaagagatgatgatgaaacaaggtatgtttttggtcaattgtgctgtcaag
tggtctttgaccacaggaaggaggcctttgccggtggtggcagcagtgatggcgtttgtt
gccgagttgaatggggtggatggtttgaagatcgaggatgtggcggagcatgttcatgcc
gtggtgtctacttgtaagttgaggtataaggagctcttggccgcacttgtcagggttgct
caagtgttgccatgggggaaagatatttcagtgaaaaatgtggtcaagtatgcaccattt
gttattcagtatatggagctaaagtcgatggaagtgcctggaggaggaggtgagagggtt
gagccttttgatatggaagatgtgattagtgagtgtttgcaaaaagttgctgcatatggg
aatgatgagaacctttctaatggtgattctcaatattttgaggtaaggaacagaagcgat
tttcctacattatccaatgataatgatggaaataaccttaagctttcacatgaatgcttg
tccttgatttattcaacgttttcaaacgaggttgatgctgagaagttgaatggacaaagt
ggacagattcatgtgcgaaagagatgggggctcgagccatatgcatatcaggattggtgg
agtgggaaatcagaattaagtaaaaagcttcttctaaagcaaattttggaaaaagaagta
ggttttgatatgatgccaccatcttttattgccggttgcaaggcaaatgagaggagaagg
caaaagattaacgccgctaaggtgcgaatcaataagataatggatccatcctatgctggt
tcagatggtagtgacaatctaaactcttcagaagttgcttgtggtgggaagaagagaaag
agaagacaagccagtgaaattgattgggaagattttgttattgaagccctccttttgcat
cgggttaaagaagaagatatcgagaaaggccattatcgagctttgctaggtttgtatgtc
ttcaactctgggacaatatga
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