Gossypium hirsutum (upland cotton): 107912745
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Entry
107912745 CDS
T04793
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107912745
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
107912745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
BRF2-like_C_cyclin_rpt
HD_4
ORC6_2nd
DUF3887
DmmA-like_C
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
107912745
NCBI-ProteinID:
XP_016696539
UniProt:
A0A1U8K7D2
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Position
A11:complement(22448526..22458079)
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AA seq
602 aa
AA seq
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MVYCNNCSRNVTGERVDDGLLSCTFCGKVLEDCIFATEPQFVKDSSGQCKLSGNFVKSTQ
SISDSRQHTIAKALDGIRSLKTGLLIDEYSDDVANVALRFYEVGLERNFTKGRRSELVQA
ACLYLACWQKGKPFLLIDFSHYLHVNVYELGSVYLQLCYVLYLADSKDLPKLIDPSIFIH
KFTNALIPEGNDEVVKTARDILASMKRDWMQTGRKPSGLCGAALYISALSHGLKFSKSKI
IEVVHICEATLSKRLIEFENTDSGALTMEEFTEKERELRTSSLTEKQPNIGSKETSLDAV
LCRHVGRKPFAHGLCNECYEEFMKVSGGIDGGSDPPAFQRAEKERMAKLSIEENNKSIAS
STFASGSEIPEISGVLEDATNKAAIDEGDNDKLPGVDDSDDGLDNFSDIDDIEVDGYLHN
EEEKHFKKIIWEEMNREYVEEQAAKEAAAAAAKEACMANYDKCPEDLQAAQKLAADVAEL
VAKSRKERQQKRAAEEKDAGPAQTAAEATRRMLVKKRLSSKINYDALEKLFDDPVTEKPK
KQKIESNSDEKEEKASKIGKECDLEDEYNDNDDDGYGGIFYGDCEYDNQEYDYEDNYDYD
GY
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggtttactgtaataattgctccagaaacgttactggagaacgcgtcgacgacggtctt
ttgtcttgcactttttgcgggaaggtgttggaagattgcatttttgcgaccgaacctcaa
ttcgtaaaagattcatctggccaatgcaaactatctggaaattttgtgaaatctacgcaa
agtatttcagattcacgccagcataccatagctaaagctcttgatggtatcagatctttg
aagactggattacttattgacgagtatagtgatgatgttgctaatgttgctttacggttt
tatgaagttggccttgaacggaatttcactaagggacgcagatcagagctagtacaggct
gcatgtctttatcttgcctgttggcaaaagggaaagccattccttcttattgatttttca
cattatttacatgtaaatgtttatgagcttggctctgtatatctgcaactttgctatgtg
ctgtaccttgctgactcaaaggatcttccgaaactaattgatccttcaatttttattcat
aaatttacaaatgctttgattccagaaggaaatgatgaagttgttaaaactgcacgggac
attttagctagcatgaaacgggactggatgcagacagggcggaaacccagtggattatgt
ggtgcagcactgtacatttctgcactttcacatggtctgaagttttctaagtcaaagatt
atagaggttgttcacatttgtgaagcaacattgtcaaagcggttgattgaatttgagaat
accgactctggagccttaacgatggaggaatttacggaaaaggagagggagcttcgaact
agttcattaactgaaaaacagccaaatattgggtcaaaagaaaccagcttagatgcagtg
ctatgtaggcatgtggggagaaaaccttttgcccatggactttgtaatgaatgttatgaa
gagttcatgaaggtttcaggagggattgatggagggtctgatccacctgcattccaacgt
gctgagaaagagagaatggcaaaattatctattgaggaaaataataaaagcatagccagc
agcacgtttgcaagtggatctgaaatacctgaaattagtggggttttagaggatgcaact
aacaaggcagccattgatgagggtgacaatgataagttacctggagttgatgatagtgat
gatggattggataacttttctgatattgatgatattgaggttgatggttaccttcacaat
gaggaggagaagcatttcaaaaagatcatttgggaagaaatgaaccgggaatatgttgag
gaacaagcagcaaaggaagcagctgcagcagcagctaaggaggcttgcatggccaactat
gataaatgcccagaggacctccaagctgcacagaagcttgctgcagatgttgcagaacta
gtggcaaaatctagaaaggagaggcaacaaaagcgagctgctgaagaaaaagatgcaggt
cctgctcagactgctgccgaggcaacccggcgaatgctggtgaagaagagattaagttca
aaaataaactatgatgcattggagaagctctttgatgacccggttacagagaaacccaag
aaacaaaaaatagaatcaaattctgatgaaaaggaggagaaggcttctaaaattggcaaa
gaatgtgatttagaagatgaatataacgacaatgatgatgatggatatggaggaattttt
tacggtgactgtgaatatgacaaccaagaatatgattatgaggataattatgattacgat
ggatattga
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