Gossypium hirsutum (upland cotton): 107912763
Help
Entry
107912763 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: 2-hydroxyacyl-CoA lyase
KO
K12261
2-hydroxyacyl-CoA lyase [EC:
4.1.2.63
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107912763
Enzymes [BR:
ghi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.63 2-hydroxyacyl-CoA lyase
107912763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPP_enzyme_M
TPP_enzyme_N
TPP_enzyme_C
CO_dh
Motif
Other DBs
NCBI-GeneID:
107912763
NCBI-ProteinID:
XP_016696561
UniProt:
A0A1U8K1Y3
LinkDB
All DBs
Position
A11:complement(22886802..22889877)
Genome browser
AA seq
565 aa
AA seq
DB search
MADCLDGNVLAAKSFARFGVTHMFGVVGIPVTGLANRAVQLGIRFIAFHNEQSAGYAASA
YGYLTGRPGLLLTVSGPGCVHGLAGLSNAMINTWPMVMISGSSDQKDSGRGDFQELDQIE
AVKPFSKFSVKAIDIKEIPDCVARVLDPAVSGRPGGCYLDLPTDVLHQTITESEAEKLLT
EVEKGRVFEATKAPPSSEIEKAVSVLRKAERPLIVFGKGXAYARAEGELKKLVERTGIPF
LPTPMGKGLVNDDHELAASAARSLAIGKCDVALVVGARLNWLLHFGESPKWDKDVKFILV
DVSEEEIKLRKPHLGLVGDAKKVLEMINKEIKDDPFCLGKSHPWVEAISKKVKDNVSKME
AQLAKDVVPFNFLTPMRIIRDAILGVGSPAPVVVSEGANTMDVGRSVLVQTEPRTRLDAG
TWGTMGVGLGYCIAAAVANPERLVVAVEGDSGFGFSAMEVETLVRYKLPVVVIVFNNGGV
YGGDRRSPEEVSGPFKDDPAPTSFVPGAAYHTLIEAFGGKGYLVGTPDELKSALSESFSA
RKPVVINVIIDPFAGAESGRMQHKN
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcggactgtttagacggcaatgttttagcagccaagtcctttgcccgtttcggcgtc
acccacatgtttggcgtcgtgggtatccccgttactggcctcgccaaccgtgcagtccaa
ttgggtatccgttttattgcttttcacaacgaacaatccgctggttatgcggcttctgct
tatggctacctcacgggccgacccggtcttctcttgactgtttccgggcccggttgcgtc
cacggcctggccggtttgtccaatgctatgatcaacacctggcccatggtcatgatctct
ggctcctccgatcagaaggattccggtcgtggagatttccaggagcttgatcagatcgaa
gcagtgaaacccttttcgaaattctctgttaaagccatagatatcaaggaaattcccgat
tgtgttgctagggttttggatcctgcagtttcgggtcgacccggtgggtgttatttggat
ttaccgactgatgtattacatcagacgataactgaatccgaagctgagaaattgttaacc
gaggtcgagaaaggaagggtttttgaagcaacaaaagcaccgccgagttctgaaatcgaa
aaggcggttagtgtgttgaggaaggcggaaaggccattgattgttttcggcaaagggncg
gcttatgcccgagctgaaggggaactaaaaaagttggttgaaagaacgggaatccccttt
ttgccaactccaatgggtaaagggctggtgaacgacgatcatgagttggccgccagtgct
gcaaggtcactcgccattggcaaatgtgatgttgcattggttgttggggcaaggctcaat
tggttattgcactttggggagagtcctaaatgggataaagatgtgaagttcattttagtg
gatgtttctgaagaagagattaagttgagaaaaccccatttaggtttagttggggatgct
aagaaggttttggagatgattaataaggagattaaagatgaccctttttgtttgggaaag
tctcatccttgggtggaggctatttcgaagaaggtgaaggataatgtgtcgaaaatggaa
gctcagttggcgaaagatgttgtgccgtttaactttttgactcctatgaggattataaga
gatgctattttgggggttgggagtccagctccggtggtggtttcagaaggggcaaataca
atggatgttggaaggtctgtgctggttcagaccgagcctaggactaggttggatgcaggg
acttgggggacaatgggagttggtttaggttattgcattgccgctgctgtggctaatcca
gaacggcttgtggttgcagtcgaaggggactcgggattcgggttcagtgctatggaggtt
gagacattggttcgatacaagttgcctgttgttgtgatagtctttaacaacggtggtgtt
tacggtggtgaccgaaggagccctgaagaagtaagtggccctttcaaagatgaccctgcg
cccacttcctttgttcctggtgctgcttaccatactttaatcgaagcttttgggggaaag
ggttaccttgtcgggacacctgacgaattaaaatctgccctttctgaatccttctctgca
aggaagccggttgtgataaatgtgataatcgatccctttgccggtgcagaaagtgggaga
atgcagcacaagaattga
DBGET
integrated database retrieval system
