Gossypium hirsutum (upland cotton): 107912860
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Entry
107912860 CDS
T04793
Name
(RefSeq) afadin- and alpha-actinin-binding protein isoform X8
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107912860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107912860
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
107912860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADIP
Runt
Motif
Other DBs
NCBI-GeneID:
107912860
NCBI-ProteinID:
XP_016696706
UniProt:
A0A1U8K2D3
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All DBs
Position
D08:complement(18355207..18361670)
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AA seq
413 aa
AA seq
DB search
MPATDAELDLPQPSQSAFSIGEYTFADAGNLDHCTKYLNQTLVTFGFPASLDLFANDPVS
VARTCNCIYSLLQQRQRDIEFRESANEQRQRLLSDISRLEAKVERLDAQLQAKDREIATI
TRTEAKNTAAFKAQIEKLQQERDEFQRMVIGNQQVRTQQIHEMKKKEKEYIKLQERLNQV
LMEKKKESRSGMEIMNLLQKEGRQRGTWNGKKADNDFYKKIVDAYEAKNQELKAENADLR
ALLRSMQVDMRDFFNAPNGLPKQSLPVSERHENDPSQSPLGGRTDVFDLPFHMARDQIEE
SLRTKMASVKERMVQLQDAQKGAEVTSEATERELELEAQLVEARSIIQEQVAKFANQKTH
SASIMSKHLATADRPRESIIPSPAEILRMHEVMPKVPDFFLSRVGDLELHERC
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgccggcaactgatgcagaattggatctccctcagccttctcagtccgccttctctatc
ggagagtatacatttgcagatgctggaaacttggaccactgtacaaagtacttgaaccag
acgctcgttacctttggctttcctgcttctctcgatctctttgccaatgatccggtttcg
gtcgcgaggacctgcaattgcatatattcattgctgcagcagcggcagcgcgacattgaa
tttagagagtctgctaatgagcaaagacaacgattattatcagatatctcaagattagag
gcaaaagttgagaggcttgatgcacagttgcaagctaaagatagagagatagcaacaatt
actagaacggaagccaaaaatactgcagcttttaaggcacagattgagaagctacagcaa
gaacgagatgaatttcagaggatggtgattggtaatcagcaagtgagaactcaacagata
catgaaatgaaaaagaaggaaaaggagtacataaagttgcaggagaggctgaaccaagtc
ttaatggaaaagaagaaggaatcaagatcaggaatggaaataatgaatttgcttcagaaa
gaagggcggcaacgtgggacctggaatgggaagaaagcagacaatgatttctataaaaag
attgtggatgcttatgaggcaaaaaatcaagaactgaaagcagaaaatgctgatttaaga
gcattactgcgctcaatgcaggtagatatgcgtgatttctttaatgctcctaatgggttg
ccaaagcaatctttgcctgttagcgaaagacatgaaaatgatccatcacaatcgccactt
ggtgggaggacggatgtctttgatcttccttttcacatggctagggatcaaatagaagaa
agtcttcgcactaagatggcttctgtaaaagagcggatggttcaattacaggatgcgcaa
aaaggtgctgaagtcacttctgaagcaacagagagggagcttgagcttgaagctcaactt
gttgaagcaaggagcataatccaggagcaggtagccaagtttgccaatcagaaaacacat
tcggcatccatcatgtccaaacatcttgccacggcagacagaccaagggaatctattatt
ccatcgccagctgagatactgaggatgcatgaggttatgccgaaggtgcccgatttcttc
ctctctagggttggtgatctggaattacatgagagatgttga
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