KEGG   Gossypium hirsutum (upland cotton): 107912876
Entry
107912876         CDS       T04793                                 
Name
(RefSeq) autophagy protein 5
  KO
K08339  autophagy-related protein 5
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    107912876
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107912876
   03029 Mitochondrial biogenesis [BR:ghi03029]
    107912876
Membrane trafficking [BR:ghi04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    107912876
Mitochondrial biogenesis [BR:ghi03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    107912876
SSDB
Motif
Pfam: ATG5_UblA ATG5_HBR ATG5_UblB
Other DBs
NCBI-GeneID: 107912876
NCBI-ProteinID: XP_016696721
UniProt: A0A1U8K2E8
LinkDB
Position
D11:19634484..19640310
AA seq 356 aa
MEAPKFVWEGAIPLQIHLHESQVTTLPPPPPALILAPRIGYLPLLAPLIKPYFSSTLPPG
VDTIWFDYNGLPLKWYIPTGVLFDLLCPEPERPWNITVHFRGYPGSVLIPCEGEDSVKWS
FINSLKEAAYIMNGNCKNVMNMSQSDQLELWHSVMNGNLEAYQRVSSKLKLATVDDEYAS
LCLQKSQQSVIETDLPAQAKTGRVPVRLYVLSVSKDFDDLDEIPRVDSWEKISYINRPVE
IRKEDKCFTLHDALKILLPELFLDESLMNVKLGGVDLEDAVRNSNEDVTSDKVVEDQGQN
ACKRPEACRISSSAEIKLIRIQGIEPKLEIPFSWVANNLLNPDYFLHVCVCVKVAQ
NT seq 1071 nt   +upstreamnt  +downstreamnt
atggaagcgccaaagtttgtatgggaaggggcaattcctcttcaaatccatctccacgaa
tcccaagtcaccactcttcctcctcctcctcctgctctgatcttagctccacggatcggg
tatctgccgctgttagcgcctttgattaagccctattttagcagcacacttcctcctggt
gttgataccatttggttcgattacaatggcctccctctcaaatggtacataccaactgga
gttctttttgatcttctgtgccctgagcctgaaaggccttggaacatcactgtccatttt
agaggatatcccggaagtgtattgataccttgtgaaggtgaagattctgtgaagtggagc
tttataaactcattgaaagaggcagcatatataatgaatggaaattgcaagaatgttatg
aacatgtctcagtctgatcagctggagctttggcattctgtcatgaatggtaatttggaa
gcctaccagcgggtctcatctaagcttaaacttgcaacggttgatgatgagtatgcaagt
ttgtgcttgcaaaaatctcaacaatccgtcatagaaacagatttgcctgcacaagcaaag
acaggaagagttccagttagattatatgttctaagcgtaagcaaggattttgatgatttg
gacgagattcctcgagttgatagttgggagaagatctcttacataaatcgacctgttgag
atccgcaaagaagataaatgcttcactttacatgatgctttgaaaatccttctgccggaa
ttgtttttagatgaatccttaatgaatgtaaaattaggcggagtagatcttgaggatgca
gttagaaattcgaatgaagatgtgaccagtgataaggtagtggaagaccagggacaaaat
gcatgtaaacgaccagaggcttgccgcatttccagtagtgccgaaatcaagcttatccga
attcagggtatcgaaccgaagttagagatacccttttcttgggtagcaaacaatttatta
aacccggactattttcttcacgtctgtgtttgtgtcaaagttgcacaataa

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