Gossypium hirsutum (upland cotton): 107912876
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Entry
107912876 CDS
T04793
Name
(RefSeq) autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107912876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107912876
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107912876
Membrane trafficking [BR:
ghi04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
107912876
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107912876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_HBR
ATG5_UblB
Motif
Other DBs
NCBI-GeneID:
107912876
NCBI-ProteinID:
XP_016696721
UniProt:
A0A1U8K2E8
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Position
D11:19634484..19640310
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AA seq
356 aa
AA seq
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MEAPKFVWEGAIPLQIHLHESQVTTLPPPPPALILAPRIGYLPLLAPLIKPYFSSTLPPG
VDTIWFDYNGLPLKWYIPTGVLFDLLCPEPERPWNITVHFRGYPGSVLIPCEGEDSVKWS
FINSLKEAAYIMNGNCKNVMNMSQSDQLELWHSVMNGNLEAYQRVSSKLKLATVDDEYAS
LCLQKSQQSVIETDLPAQAKTGRVPVRLYVLSVSKDFDDLDEIPRVDSWEKISYINRPVE
IRKEDKCFTLHDALKILLPELFLDESLMNVKLGGVDLEDAVRNSNEDVTSDKVVEDQGQN
ACKRPEACRISSSAEIKLIRIQGIEPKLEIPFSWVANNLLNPDYFLHVCVCVKVAQ
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgccaaagtttgtatgggaaggggcaattcctcttcaaatccatctccacgaa
tcccaagtcaccactcttcctcctcctcctcctgctctgatcttagctccacggatcggg
tatctgccgctgttagcgcctttgattaagccctattttagcagcacacttcctcctggt
gttgataccatttggttcgattacaatggcctccctctcaaatggtacataccaactgga
gttctttttgatcttctgtgccctgagcctgaaaggccttggaacatcactgtccatttt
agaggatatcccggaagtgtattgataccttgtgaaggtgaagattctgtgaagtggagc
tttataaactcattgaaagaggcagcatatataatgaatggaaattgcaagaatgttatg
aacatgtctcagtctgatcagctggagctttggcattctgtcatgaatggtaatttggaa
gcctaccagcgggtctcatctaagcttaaacttgcaacggttgatgatgagtatgcaagt
ttgtgcttgcaaaaatctcaacaatccgtcatagaaacagatttgcctgcacaagcaaag
acaggaagagttccagttagattatatgttctaagcgtaagcaaggattttgatgatttg
gacgagattcctcgagttgatagttgggagaagatctcttacataaatcgacctgttgag
atccgcaaagaagataaatgcttcactttacatgatgctttgaaaatccttctgccggaa
ttgtttttagatgaatccttaatgaatgtaaaattaggcggagtagatcttgaggatgca
gttagaaattcgaatgaagatgtgaccagtgataaggtagtggaagaccagggacaaaat
gcatgtaaacgaccagaggcttgccgcatttccagtagtgccgaaatcaagcttatccga
attcagggtatcgaaccgaagttagagatacccttttcttgggtagcaaacaatttatta
aacccggactattttcttcacgtctgtgtttgtgtcaaagttgcacaataa
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integrated database retrieval system