Gossypium hirsutum (upland cotton): 107912895
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Entry
107912895 CDS
T04793
Name
(RefSeq) tryptophan synthase beta chain 2 isoform X1
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00260
Glycine, serine and threonine metabolism
ghi00400
Phenylalanine, tyrosine and tryptophan biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
ghi01230
Biosynthesis of amino acids
Module
ghi_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
107912895
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
107912895
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
107912895
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Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
107912895
NCBI-ProteinID:
XP_016696753
UniProt:
A0A1U8K6Z5
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Position
D11:19400148..19403937
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AA seq
504 aa
AA seq
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MATHSVFNPNPVSTFTSSTISTKGDKQWPGYLMLNGEQMHVRLSNGYRARARSVINVNST
AIEIPHQWYNLVADLAIKPPPPLHPKTFEPVKPEDLSPLFADELIKQEVTDERFIDIPEE
VIDVYRLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNTAVPQVYYNAQQGVK
NVVTETGAGQWGSSLAFACSLFGLGCEVWQVRASYDQKPYRKLMMQTWGAKVHPSPSDIT
HAGRKILQMDPSSPGSLGIAISEAVEIAAANDDTKYCLGSVLNHVLLHQTVIGEECIRQM
EAIGETPDLIIGCTGGGSNFAGLSFPFIREKLKGKINPVIRAVEPAACPSLTKGVYAYDF
GDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLISHVHELGFMEAISIPQTECFQG
AIRFARSEGIIPAPEPTHAIAATIREAVRCRESGESKVILMAMCGHGHFDLASYEKYLQG
SLVDLSFEEEKIKESLAKVPQVQA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggccacccactcagttttcaatccaaacccagtttccacctttacttcgtccaccatt
tccactaaaggagacaagcaatggcctggatatcttatgcttaatggagaacaaatgcat
gtaaggctttccaacggttatagagcaagagcaagatcagttataaatgtcaattctaca
gcaatcgaaattcctcatcaatggtacaatctggttgcagatctagctataaagcctccg
cctccattgcatcccaaaacatttgaaccggttaaaccagaagatttgtctcctttattt
gccgatgaattaattaagcaagaggttaccgatgaaaggttcatagatattccagaagaa
gttattgacgtatacagactttggcgcccgacccctttaatcagagccaagaggttggag
aagcttcttgatacacctgctcggatttattacaagtacgaaggtgtcagccctgccgga
tcgcataagccgaacactgcagttccgcaagtttactacaatgcacagcaaggggtcaag
aatgtcgtgactgaaactggtgctggccaatggggtagttcattggcctttgcctgcagc
ttgttcggtcttggctgtgaagtgtggcaagttcgtgcttcttatgatcagaaaccatat
cggaaattgatgatgcaaacatggggtgcaaaggttcatccttctccatctgacattacc
cacgcaggtcgtaaaatacttcaaatggatccttctagccccggaagtttagggatagct
atttcagaagctgtagagattgccgctgcaaatgatgataccaagtattgcctggggagt
gttctaaatcatgttttgctacatcaaaccgtgataggagaggagtgtattcgacaaatg
gaggccatcggtgaaaccccggacttaatcatcgggtgtaccggcggtggctcgaatttc
gcaggacttagtttcccatttatcagagaaaagctcaagggaaaaatcaaccctgttata
cgagcagtcgaacctgcggcttgtccttcattaacaaaaggtgtctatgcatacgatttt
ggtgatactgctgggatgactccattgatgaagatgcatacactggggcatgatttcatt
ccggatccaattcatgccggtggcttacgttaccatggtatggcacctttgatttcgcac
gtccatgaattaggcttcatggaagcaatttcgatcccgcaaactgagtgctttcagggc
gcaatacgattcgcgcgatctgaagggataattccagctcccgagccaactcatgctatt
gcagctaccattcgggaagctgttcgctgcagagagagtggggaatcaaaggtgatattg
atggcaatgtgtgggcatggccactttgatctggcttcttatgagaagtatttgcaggga
agtttagttgatttatcatttgaagaggagaaaattaaagaatcattggccaaagttcct
caagtgcaggcatag
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