Gossypium hirsutum (upland cotton): 107912975
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Entry
107912975 CDS
T04793
Name
(RefSeq) autophagy-related protein 18b
KO
K17908
autophagy-related protein 18
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107912975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107912975
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107912975
Membrane trafficking [BR:
ghi04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
107912975
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107912975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_Vps41
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
WD40_CDC20-Fz
WD40_MABP1-WDR62_1st
BCAS3_WD40
WDR55
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
EIF3I
DUF2415
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
107912975
NCBI-ProteinID:
XP_016696862
UniProt:
A0A1U8K317
LinkDB
All DBs
Position
D04:complement(22052713..22066681)
Genome browser
AA seq
369 aa
AA seq
DB search
MANQSSRYPILCASFNQDNSGFAISTKDGFKIIDSNTGRLCYDRAVGAFIIVEMLYSSSL
LAIVGAGEQPSLSPRRLCLFNTTTGAPLREMTFLTSILAVRLNRKRLVVVLQEKTYIYDS
NSLSMLDTIDTVPNLKGLCAFSPSLEGCFLALPATTAKGAVLVYNVMELQLHCEIDAHRS
PLAAIALSSNGKYIATASEQGTIIRVHLVSEATKSYSFRRGTCPSTIFSLSFAPSLQLPD
ILVATSSSGSVHIFSLGFETNQRTKMSGSFLGSILPYSVNDALDPAHHHVLHNAVSAGVR
SYAVVRKVDKVADSSSSEIASCRAIISLIAYNGYFQEYTFTLNSQNESTWSLEREFNLVA
VISGNAETS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcagtcctcccgttacccaatcctctgcgcttccttcaatcaagacaacagt
ggttttgcaataagcactaaagatggcttcaaaattatcgattcaaacaccggaaggctc
tgctacgatcgtgctgttggagcttttattattgttgaaatgctgtatagttcaagtctt
ctcgccattgtcggagccggtgaacagccatctttatctccacgccgtctctgtttgttc
aatacaacaaccggtgctcctctccgagaaatgactttcctgacttcaattcttgctgtt
cgcttaaataggaaaaggcttgttgtggttttgcaagagaaaacatacatatatgattca
aacagtctttcaatgttggataccattgatactgtgccaaatttaaagggactttgtgca
ttctcccctagtttggagggttgcttcttggctcttcctgccaccacggccaaaggagct
gtattagtgtacaatgtcatggagcttcagttgcattgtgagatagatgctcaccggtct
cctttggctgcaattgccttatcttccaatgggaaatacattgcaacagcatctgaacag
ggaactataatcagagttcatttggtttcagaagcaactaagtcatacagtttccggagg
ggaacatgcccgtcaaccatattttcattgtcatttgcaccatcattgcaacttccagat
attcttgtggccacaagctcttcaggttctgttcatatcttctctctggggtttgagaca
aatcagaggaccaaaatgtcaggtagttttcttggatcaatattaccttattctgtgaat
gatgcactagatccagctcaccatcatgtgcttcacaatgctgtttctgcgggagtcaga
agctatgcagtggtacggaaggtagacaaagttgctgattcatcctcatctgagattgca
tcttgtagggccataatatcgttgatagcatacaatgggtactttcaggaatataccttc
actctcaacagccagaacgagtctacatggagcctggagcgtgaattcaaccttgtggca
gtcatttcaggtaatgcggaaacctcatga
DBGET
integrated database retrieval system
