Gossypium hirsutum (upland cotton): 107912988
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Entry
107912988 CDS
T04793
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107912988
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
107912988
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
107912988
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Toxin_20
Oxidored_nitro
Motif
Other DBs
NCBI-GeneID:
107912988
NCBI-ProteinID:
XP_016696872
UniProt:
A0A1U8K327
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Position
A11:complement(24879105..24882574)
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AA seq
639 aa
AA seq
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MKIVTYNVNGLRQRVSQFGSLLKLLNSFDADIICIQETKLRRQELTADLAIADGYESFFS
CTRSSDKGRTGYSGVATFCRVKSAFSSVEAALPIAAEEGFTGLLGCSRKDEAASAVAEGL
VEFSREELLKVDSEGRCIITDHGHFVLFNLYGPRAGDGDSERIQFKLNFFKILEKRWESL
LCRGRRIFVVGDLNIAPSAIDRCEAGPDFEKNEFRTWFRSMLVESGGHFFDVFRAKNPNR
REAFTCWPSNTGAEQFNYGTRIDHILCAGPCLHEEHDVEGHNLVTCHVKECDILTEYKRW
KPGSATRWKGGWNIKLEGSDHAPVYTCLREIPDVLEHSTPSLAARYLPMVHGLQQTLVSV
LMRRQATKQVKSDVVSSSFPDESIISGGCSHVKRSIANCDANGTDISCCSLDQDSRNPIL
KVVGHSEDLKEEAACSTTIVFNEEYTSPLPNKRTRKRARKSQQLSLRSFFPKSQNLDYGI
ENSTNDISTNQTGVLNSNNQSQEAPVMDDRRCTTMQNDTNGISSSQGQEEPDRPCSPAQN
NTNGNASSQGQEEQDGSRYLEKQKKSDALLEWQRIQQLMQNSIPLCKGHREPCVSRVVKK
PGPNFGHRFYVCARAEGPSSNPEANCGYFRWASTKSRPK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtaacttacaacgtaaatggactgaggcaaagagtctcacagttcggttct
ctccttaaattactcaattcctttgatgctgatattatctgcatccaggagacgaaattg
agaagacaagaattaacggcggatttggcaatagccgatggctatgaatccttcttttcc
tgcactcgttcctccgacaaaggccgaactgggtactccggtgtggcaacattttgtcgt
gttaagtcggcgttctccagtgtagaagcggcgttgccgattgcggcggaggaaggcttc
acgggtctcctaggttgttctagaaaagacgaagcagcttcagcagtagctgaagggctt
gtggagttttcaagagaggagcttctcaaagttgatagtgaggggcggtgcattatcaca
gatcatggtcatttcgttcttttcaacttgtatggaccccgagcaggggacggtgattct
gagagaattcagttcaagctcaactttttcaagatattagagaaaagatgggagtctctg
ttgtgtcgaggaaggaggatttttgttgttggtgacctcaacattgctccttctgctatt
gatcgttgtgaagctggaccagattttgagaagaatgagtttagaacatggtttagatca
atgctagtggaatctggaggccatttctttgatgttttcagggccaaaaatccaaacaga
agagaagcatttacatgctggccttcaaatactggtgctgagcaattcaattatgggaca
agaattgatcatattctatgtgctgggccttgcttacatgaggagcacgatgtagaggga
cataatttggtaacctgccatgtgaaggagtgtgacatcttgacagaatacaagcggtgg
aagcctggaagtgcaacaaggtggaaaggagggtggaacattaagttagaaggttcggac
catgcacctgtttatacgtgcttaagggaaatccctgatgtcttagaacatagcactcca
tctttagctgctagatatctgccaatggttcatggtctgcagcaaactcttgtgtcagtt
ttaatgagaaggcaagctactaagcaagtcaaatccgatgtagtatcaagttcatttcct
gatgaaagtatcatctcaggaggttgcagtcatgtaaaaaggtctatagctaattgtgat
gctaatggaacagatatatcctgctgttctttggaccaggactcccgaaaccccatccta
aaagttgttggtcattctgaagatctcaaagaggaggctgcttgtagcactaccattgta
ttcaacgaggagtacaccagtccattgcctaacaaacgaaccaggaaaagagctagaaag
agtcaacagctctccttgagatcatttttcccgaaaagtcaaaacctagattatggcatc
gagaattctacaaatgatatttcaactaaccagaccggtgtcctaaactctaacaatcag
tcccaggaagctcctgtgatggatgatcgtagatgcactaccatgcagaatgatacaaat
ggaatttcatcctcacagggtcaagaagaaccagatcgtccatgtagtccagcacaaaac
aacacaaatgggaatgcatcctcacagggtcaagaagaacaagatggtagtcgttatttg
gagaaacagaagaagagtgatgcattattggagtggcaaaggatccaacaactcatgcag
aacagcatacctctttgcaagggccatagagaaccttgtgtttctcgagtagtgaagaaa
ccaggtcctaattttggtcataggttctacgtgtgtgctcgagctgagggtccttcttcc
aaccccgaagcaaattgtggttacttcagatgggcttctacgaagtcacggccaaaatga
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