Gossypium hirsutum (upland cotton): 107913028
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Entry
107913028 CDS
T04793
Name
(RefSeq) protein SHORT INTERNODES-like
KO
K27807
short internodes/stylish family transcription factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107913028
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
107913028
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GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
107913028
NCBI-ProteinID:
XP_016696949
UniProt:
A0A1U8K8J0
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Position
D11:complement(21505312..21510234)
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AA seq
391 aa
AA seq
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MAGFFSLGGRGSNSQEDQRNNPPPTDIQPESWFWYKNEDASFKGFELWQQQEAFQRQDQS
IGSNNNNNQQGQQLQDLYSSAAGLGVGPSRSSINIADDSSSRSAFMMMGGGGGGVSCQDC
GNQAKKDCLHMRCRTCCKSRGFDCQTHVKSTWVPASKRRERQQQLASLQQQQQQLRGENP
KRQRENPTSSPLAFTRLPTNASGLEVGDFPAEVNSEAMFRCVRVSGIEDGDDQYAYQTAV
NIGGHVFKGILYNQGPESGYNMAAAVGESSSGDGIQQLDLITAGPTAAASNAGTGAGNAS
CSSVTAAASSSTVAFLDPSSLYAAPLNTFMADFLAGFFQLGEAAFPCCCFPVCLPVSMWD
EYWFLLWLDKLQRQHLFFLITVWAVQPSMKA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcggggtttttttcactaggaggaagagggagcaacagccaagaagaccaacgaaac
aatccaccgccgaccgatatccaacccgagagctggttttggtacaaaaatgaggatgct
tctttcaagggtttcgaattgtggcaacagcaagaagctttccaacgccaggaccaaagc
atcggcagcaacaacaacaacaaccagcaaggccaacagctacaagatctttattcgtca
gcagctggattaggagttgggcctagcaggagctcgatcaacatcgctgatgattcctcc
tcgagatcggcttttatgatgatgggtggtggaggtggaggcgtaagttgccaagattgt
ggtaatcaagctaagaaggattgccttcacatgaggtgtagaacctgttgtaaaagccga
ggattcgactgccaaacccatgttaaaagtacttgggttcctgcttccaagcgccgtgaa
agacaacaacaacttgcttctttacagcagcagcaacaacagcttcgtggagagaatccc
aaaagacagcgagagaatccaacatcttctcctcttgccttcactcgtttacccacaaat
gcgtcagggttagaagtgggggattttccggcagaagtgaactctgaagcgatgttccgg
tgcgtgagagtgagtggcattgaagatggtgacgatcagtatgcttatcagacggctgtg
aacatcggagggcatgttttcaagggaattctttacaatcaaggccccgaaagcggctac
aacatggctgcagcagttggtgagagttcttccggcgatggaatccaacaacttgatctt
attactgctggtcccaccgccgccgcttccaacgcgggtaccggcgcaggcaacgccagt
tgcagcagcgttacagccgctgcgtcttcatcaaccgtcgcatttttagatccttcctct
ctttatgcagctccactcaacactttcatggctgattttctggctggtttttttcaactt
ggggaagctgcttttccctgttgctgttttcccgtatgcttaccagtttcaatgtgggac
gaatattggtttcttctttggttggacaaactacaaagacagcatctttttttccttatc
acggtatgggcggtccagccatccatgaaagcttag
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