Gossypium hirsutum (upland cotton): 107913068 Help Entry 107913068         CDS       T04793                                  Name (RefSeq) vacuolar sorting protein 39   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism ghi  Gossypium hirsutum (upland cotton) Pathway ghi04148   Efferocytosis Brite KEGG Orthology (KO) [BR:ghi00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     107913068  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ghi04131]     107913068 Membrane trafficking [BR:ghi04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     107913068 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H zf-HC5HC2H_2 AlaDh_PNT_N Motif Other DBs NCBI-GeneID:  107913068 NCBI-ProteinID:  XP_016697000 UniProt:  A0A1U8K3C3 LinkDB All DBs Position D11:complement(22331815..22337507) Genome browser AA seq 1000 aa AA seqDB search MVHSAYDSFQLLTDCPTKIDAIESYGSKLLLGCSDGSLRIYVSDSSGADRSPPSDPHALR KEPYALERTVAGFSKKPLISMEVLESRELLLSLSESIAFHRLPNLETIAVITKAKGANVY SWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKDFGVPDTVKSMSWCGENICLGIRKEYMI LNATNGALSEVFSSGKIAPPLVVALPSGELILGKENIGVFVDQNGKLLQADRICWSEAPA VVVIQKPYAIALFPRRVEIRSLRVPYPLIQTIVLPGARRLTKSNNAVVVALEKSVYGLFP VPLGAQIVQLTASGNFEEALALCKLLPPEDASLRAAKEGSIHIRYAHYLFDNGCYEEAME HFLASQVDITYVLSLYQSIVLPKTTAVPEPEKLVDLSLDAPQLSRGSSGMSDDLETFLPQ LAESDENSALEFKKMSHNTLMALIKFLQKKRYSIVEKAAAEGTEEVVLDAVGDSFTSSRF KKSNKGRGNVPINSAAREMAAILDTALLQALLLTGQSSAAVELLKGLNYCDAKICEEILH KGHHYAALLELYRSNSMHREALTLLHQLVEESKSNQLQAEPIQKFSPEAIIEYLKPLCGT DPMLVLEFSMLVLESCPTQTIELFLSGNIPADLVNSYLKQHAPNMQGRYLELMLAMNENG ISGNLQNEMVQIYLSEVLEWYSELSAQQIWDEKAYSPTRKKLLSALESISGYSPEALLKR LPPDALFEERASLLGKMNQHELALSLYVHKLNVPELALAYCDRVYESSGDQPPAKSSGNI YLTLLQIYLNPQKTTKNFEKRITNLVSSPNASIPKISSATSFKGRGGRKKIASIEGAEDM RISPSNTDSSRSDGDADAEESNEEGGSSIMLDQVLDLLSRRWDRINGAQALRLLPRETKL QNLLPFLGPLLKKSSEAYRNFSVIKSLRQSENLQVKDELYNQRKAVVKISSDSMCSLCNK KLGTSVFAVYPNGTTLVHFVCFRDSQSMKAVSKVSQLRKR NT seq 3003 nt NT seq  +upstreamnt  +downstreamnt atggtgcacagcgcctatgattccttccagctcctcaccgattgtcccactaagatcgac gccatcgaatcctacggctcgaagctgctgctgggctgctccgatggttctcttcgaatc tacgtttctgattcctccggcgctgaccgatctccaccgtccgacccgcacgcgttgcgg aaggaaccttacgcgctggagagaaccgttgcagggttttcaaagaagcctctgatttca atggaagtactggaatcgagagagctactgttatcactctctgaatcgatcgcgtttcat cggctccccaatttagagaccattgctgtgatcaccaaagctaaaggcgctaatgtctac tcttgggatgaccgtagaggttttctttgctttgctaggcaaaagagagtctgtattttc aggcacgacggagggcgagggtttgtggaggtgaaagattttggtgtaccagatactgta aagtcaatgtcatggtgtggtgagaacatatgtctaggtattagaaaggaatacatgata ttaaatgccacaaatggtgcgttgtcagaggtgttttcttcggggaagatagcaccacct ttggtcgttgctcttccctctggggaacttattcttgggaaggaaaatattggtgtcttt gtggatcaaaatggaaagcttcttcaagctgataggatatgttggtcagaagctcctgct gttgttgtcattcagaaaccatatgctatcgctctatttcctaggcgtgttgagattcgc tctcttcgagttccttatccattgatacagacaattgtactccccggtgctcgtcgtctt acgaaaagtaacaatgccgttgttgtagccttagaaaagtctgtttatggactctttcct gttcctcttggtgcacagattgtccaattaacagcatctggaaattttgaagaagcactg gccttgtgtaagctgcttccaccagaagatgcaagtcttagagctgcaaaggagggctca attcatataagatacgctcattatctttttgacaatgggtgctatgaggaagcaatggag cactttttggcatctcaagtggatattacttatgttctttctttgtatcagtccattgtt cttcccaaaacaaccgcagttccagagccagagaagctggtggacctttctctggacgct ccacaactttcacgaggttcatctggaatgtcagatgatctggaaaccttccttccacaa ctagcagaatctgatgagaattctgcgcttgagttcaagaaaatgagccataatactctt atggctcttattaagttcctacagaagaagagatacagtattgtagagaaggctgctgct gagggaactgaagaggtagttttagatgctgttggggatagttttacatcgtcaaggttt aagaaatcaaataaggggcgtggtaatgttccaattaactcagctgctagggagatggca gctatactggatacagccctcctccaagctctgcttcttaccggacaatcctcagcagct gttgaattgctgaaaggtcttaactattgtgatgcaaaaatatgtgaggagatccttcat aaagggcatcattatgcagctcttttagaactttacagaagcaactccatgcatcgggag gctctaacacttttacatcaattagtagaagagtcaaaatcaaaccaattgcaggctgaa cccatccaaaagttcagtcctgaggcaattattgaatacctcaagcctctctgtggcact gatcccatgcttgtacttgagttctcaatgcttgttcttgaaagctgtccaacacaaacc attgagctttttttgtctggaaatattccagcagacttggtcaactcttacttgaagcag catgctccaaacatgcagggcaggtacttggagcttatgcttgccatgaatgaaaatggg atctcagggaatctgcaaaatgaaatggtacaaatatatctctctgaagtacttgaatgg tattcagaactaagtgctcaacagatatgggatgagaaggcttattctccaaccaggaag aaactattgtctgcattggaaagcatctcaggatacagtcctgaggctttgttgaaacgt cttcctccagatgctctatttgaagagcgtgcgagtctgttgggaaaaatgaaccaacat gagcttgctctatcactatatgttcataagcttaatgtacctgaactggcactggcctat tgcgatcgggtttatgagtcatctggtgatcaaccaccagcaaaatcttctggcaatata tacctcactctgttacagatatatctgaatcctcaaaagacaaccaagaactttgaaaag agaattacaaatttagtatcatccccaaacgcaagcatcccgaagattagttcagcaact tcatttaaaggtagaggaggacgaaagaaaattgcctcaatagaaggtgcagaagatatg cgtattagtcccagtaatactgatagtagtaggagtgatggtgatgctgatgctgaagaa tctaatgaggaaggaggttcttctatcatgcttgatcaggtacttgatcttttgagccga aggtgggatagaatcaatggagctcaggcacttagactgttacccagggagactaaacta cagaacttgcttccatttcttggacctcttctgaaaaaatccagtgaagcatacaggaac ttctctgttatcaagagcttgaggcagagtgagaacctacaggtgaaggatgaactctac aaccaacgaaaagctgtagtgaagatatcgagtgacagtatgtgctctctctgcaacaag aaactgggaacaagtgtatttgccgtctatccaaatgggacaacactggtccactttgtt tgttttagagattcacaaagtatgaaagcagtatccaaagtctcacaactaaggaagcga tga

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