Gossypium hirsutum (upland cotton): 107913072
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Entry
107913072 CDS
T04793
Name
(RefSeq) nucleolar protein 6-like isoform X1
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107913072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107913072
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107913072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
107913072
NCBI-ProteinID:
XP_016697003
UniProt:
A0A1U8K7Q7
LinkDB
All DBs
Position
D11:22311811..22318860
Genome browser
AA seq
1046 aa
AA seq
DB search
METETCIDSMDFKVQELLKEARLECSSLLTKLVDDTVSAIKSAIDKIPEGLQVTADWAPG
FVRDIGADKAEFKFKKPKSIEIGGSYSIGCIAKPDVNIDLLLRLPKECFHEKDYLNYRYH
AKRCLYLCVIKKHLKSSSSIQKVEWSALQNEARKPVLVVYPAANLGEVPGLFIRIIPTAT
SLFDLSKLNMKRNNVRALNAGDDPQPTPIYNCSILEDMYLEEKSNFIKKTFSGWKELGEA
LILLKVWARLRSSIYVHDCLNGFLISIIVSYLVAKNKINRDMMPMGIFRATLKFIETQPL
WKHGLYFPMSDQNVSSKGNEQLNSLTRFNLAFRISSVAYPELQDEVALTLRCLEKCRDGG
FEEIFTTKIDNAAKYDYCIRLNLKGNSEVYSLGFCLDEECWRVYEQDVHSLLNQGLTDRA
KFIRVIWRNTYSDFNVENGLSALDSEPLFVGISVSSVEKAFRVVDIGPNAEKKDEALMFR
KFWGEKAELRRFQDGKIAESTVWESKQGTRHLILKRIIEFLLGRHLSLSKKDIVPVVDQL
DFCLLHDGKDPVSHSAKLLGTFEELSKRLRSIEDVPLKISSVQPLDSAFRFTSVFPPEPH
PLASKKVDVARLHNLTPFCVQSLEVMIQLEGSGNWPMDDVLIEKTKSVFLLKIAESLQDN
WGITCTVTEEDVDVFMDGYAFRLRILHERGLSLVNKEIGGDQMKRVSSADKMLFVRSQHA
SMINGLQFRYPIFGPVVRLAKRWLASHLFSACLAEEAAELLVAYLFLKPLPFNVPCSRIT
GFLRFLRLLAEHDWAFSPLVVDINGDLSQNDEKEIDDNFTQSRKAYEENTQNESKAMFLA
TAYDKASEAWTRCSPNPLELKRLAAYARSSASLLTKLILQNQTDSRGWEVHYTCLLRTPL
SLYDAVILLHGDRLPYPKRLLFTSELDQGRHVAHGNASTCFHPFLLPSDMKGSSLEQLKT
KLMVNFDPLRCFVGDVEKGFSNRLKLWYDSLGGDAIGLTWERSKKREREEEETDGKYPVD
LLRNIGELGKGFVRDVYLLKAPRLSS
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggagactgaaacttgcattgactctatggacttcaaagttcaagagttattaaaggag
gctcgtctcgaatgttcgtctctacttaccaagctcgtcgacgacaccgtttccgccatc
aaatccgccatagataaaattcctgaaggccttcaggttaccgcggattgggctccaggt
tttgtgagagatattggtgcagacaaagccgaatttaaatttaagaagccgaagtctatt
gaaattggtggtagttattcaataggctgcatagcaaaaccagatgttaatatcgatctt
ctcctccgcttaccaaaggaatgtttccacgagaaagactacctaaattaccggtatcat
gctaaaaggtgcctttacctctgtgttataaagaagcacttgaaatcctcttcatcaatt
cagaaggttgaatggtctgctttgcaaaacgaggctaggaaacctgtattggttgtctat
ccagctgcaaaccttggtgaagttcctgggctttttataagaataattcccacagcaaca
tccctatttgatctttccaagttgaacatgaagcggaacaatgtacgagctctgaatgca
ggggatgatcctcagcctacaccaatatataattgtagcatattggaagacatgtattta
gaggagaagtcaaattttattaagaaaacattttctggatggaaggaattgggagaggcc
ttaatcttgctgaaggtctgggctcggttgagaagttcgatatatgttcatgattgctta
aatgggtttctaatatctattatagtgtcgtaccttgtggccaaaaataagattaaccgt
gatatgatgccaatggggatatttcgtgccacattgaaatttattgaaactcaaccattg
tggaagcatggactttactttccaatgtcagaccagaatgtttcttctaagggaaatgag
cagcttaattctttaacccgcttcaatttggcattcagaatatcaagtgttgcttatcct
gagctacaagatgaagttgcgttaacacttaggtgtttagaaaaatgcagagatggtgga
tttgaggaaattttcacaaccaagattgacaatgctgctaaatacgattattgcattaga
ttgaacttgaaaggaaatagtgaggtttattctctgggattttgcttggatgaggaatgt
tggagagtgtatgagcaggatgtacacagtctgcttaatcaaggattgactgatagagca
aagtttattcgtgttatttggaggaacacttattcggactttaatgttgaaaatggctta
tcagcacttgatagtgagccattatttgttggaatttcagtgagctctgtagagaaggct
tttagggttgtagatattggcccaaatgctgaaaagaaagacgaggctctcatgtttcga
aaattttggggtgagaaggctgagcttcggagatttcaagatggtaaaattgcagaaagc
acagtatgggagagcaagcaggggacaagacatctcattttaaaaagaattattgagttt
ttactgggacgccatctttctttatcgaaaaaggatattgtcccagtagtggatcagctt
gatttctgtttgctacatgatggtaaagacccggtatcacattctgcaaaactgcttgga
acttttgaagaattgtctaaacgattgcgttctattgaagatgttcccttgaagatatct
agtgtgcagcctcttgattctgccttcaggtttacttctgtatttcctcctgaacctcat
cctctggcaagtaaaaaggtggatgtggcaaggttacataatttgaccccattctgtgtt
cagtcacttgaagttatgattcagttggaaggttctgggaattggccaatggatgatgtc
ttaattgagaaaactaaatcagttttccttctgaaaattgcagaaagtcttcaggataac
tgggggataacatgtactgttactgaggaagatgtggatgttttcatggatggatatgca
tttcgtcttagaattttgcatgagagaggcctaagcctggtgaataaagaaattggaggt
gaccaaatgaagcgggtttcatctgctgataaaatgctttttgttcgtagtcaacatgca
agcatgataaatggattacagtttcgttacccgatatttgggccggttgttaggcttgca
aaacggtggcttgcttcacatctcttttcagcttgcttggcagaagaggctgctgagcta
ttagttgcctacctctttttgaagcctctaccatttaatgttccctgttcgcggatcact
ggatttttaaggttcttgcgactactagctgaacatgattgggctttttctccattggtt
gttgatataaatggtgatctgagccaaaatgatgagaaagagattgatgataactttacg
caaagtagaaaagcttatgaagaaaacacccaaaacgaaagcaaggccatgttcctggct
actgcttatgacaaggcatctgaagcttggactagatgctcaccaaatccattggagctc
aaaaggttggcggcttatgctcgaagcagtgcaagcttgttgacaaaactcatattgcaa
aatcagactgattcccgtggatgggaggtgcattatacatgccttctccgaactccactg
agcctctatgatgctgtaatacttctccatggagatagattaccttacccaaaacgtctc
ctcttcacatctgaactggaccaagggcggcatgtggctcatggcaatgctagcacttgt
ttccaccccttcctattgccttctgatatgaagggtagtagcttagagcaacttaaaacc
aagctaatggtaaactttgatccactaaggtgctttgttggagatgtagagaaagggttc
tccaacagattgaagttatggtatgattcattaggaggtgatgctatcggtctaacatgg
gaacggtcaaagaaacgagaacgagaagaggaagagacggacggaaaatatccggttgat
ttgttgagaaatataggtgaactggggaaaggatttgtgagagatgtttatctgctcaag
gctcccaggctttcgagttaa
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