Gossypium hirsutum (upland cotton): 107913094
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Entry
107913094 CDS
T04793
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1-like isoform X1
KO
K25869
zinc finger protein IDD1/2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107913094
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107913094
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
DUF5327
Motif
Other DBs
NCBI-GeneID:
107913094
NCBI-ProteinID:
XP_040962449
UniProt:
A0A1U8K7T4
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Position
D11:22713032..22716167
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AA seq
529 aa
AA seq
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MPVDLDNSSTASGEASVTSSGNQNPLPKSTAKKKRNLPGMPDPDAEVIALSPRTLLATNR
FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVKKRVYVCPEITCVHHHPSRALGD
LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTVFSRRDSFIT
HRAFCDVLAEERAKAQTQPQPQNQNQTATKESDPKPQTTDSSPPSAAAPVSVSAPESGKV
PAPAPAVPQLTSVISSSALPIQSSDLPENPSPIMEESLAPAPAAAPTGLNGSCSSSASLG
SNGSSGSGSRCSVFASLFASSTTSASLKPQQPPVFIDLFQSVGQPDCLTDLAPSPSIEPI
SLCLSTNHGSSIFGTAGQEHRQYAPPPQPAMSATALLQKAAQMGATATNASLLHGLGIAS
LSSSSAQQDNLQWGQRQVEPENTSVVAGLGLGLPRDGSSGLKELMMGTPVFGPKQATLDF
LGLGMAAGGSPNGGLSALITSIGGELDVVAAATSFGGGDFTSKDIGRSS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcgacttagataattcatccaccgcttccggtgaagctagcgtcacgtcctcc
ggtaaccaaaacccacttcccaaatccaccgccaagaagaaacgtaacctccctggaatg
ccagatccagatgcggaggttattgctttatctccgaggactcttctagcgacgaatcga
ttcgtttgtgaaatttgcaacaaagggtttcaaagggaccagaatcttcagcttcataga
cgaggtcataatttaccatggaagctgaggcagagatcaagtaaggaagtgaaaaagaga
gtttatgtttgtcctgagatcacttgtgtccatcaccatccatcaagagctttgggcgat
cttacgggaattaagaagcatttctgtagaaaacatggtgaaaaaaagtggaaatgcgat
aagtgttccaaaaaatatgctgttcaatcggattggaaagctcactccaagatttgcggt
actcgggagtacaaatgtgattgtggaactgtcttttccaggagggatagttttatcacc
cacagggctttctgtgatgtgttggcagaggagagggctaaagctcaaacacaaccgcag
cctcagaatcagaatcaaactgccaccaaagaatccgacccaaaacctcagactacggat
tcttcaccaccatctgcagctgcaccggtatcggtttctgcgccagaatcagggaaagtt
ccagctccagctccagctgtgcctcagttaactagtgtgatatcttcttcagctttgcca
attcaaagttctgacttgcctgaaaatcccagtcctatcatggaagaatctctggctcca
gctccagctgcggcaccaacaggtttgaatggaagttgtagtagtagcgccagcttaggt
agcaatggcagtagcggtagtggcagccgctgcagtgtatttgctagcttatttgcatcc
tcaactacatctgcgagcttaaaacctcagcaacctccggttttcatcgacttatttcaa
tctgtaggtcaaccagattgtcttactgaccttgcgccatctccatccatcgaaccaatt
tctctatgcctctcaacaaaccatgggtcatcaatatttgggactgcagggcaagagcac
aggcaatacgcaccaccaccacaacctgctatgtctgccacagcactgctgcagaaagct
gctcagatgggagcaaccgcaactaatgcatccttgcttcatggtttgggtatagcttca
ttatcttcatcatccgcacagcaagataatttgcaatggggtcagagacaggttgagcct
gagaatacctctgttgtagcagggcttggccttgggcttcctcgtgatggaagttcagga
ttaaaggaattgatgatgggaactcctgtatttggtcctaagcaagcaactctcgatttt
cttggattgggaatggctgctggtggcagccccaatggtggcctgtcagctctaattacc
tccattggaggtgaacttgatgttgttgcagcagcaacttcatttgggggtggagatttc
accagcaaggacattggaaggagctcataa
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