Gossypium hirsutum (upland cotton): 107913106
Help
Entry
107913106 CDS
T04793
Name
(RefSeq) probable ubiquitin-like-specific protease 2B isoform X1
KO
K08596
sentrin-specific protease 7 [EC:
3.4.22.68
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107913106
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107913106
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.68 Ulp1 peptidase
107913106
Peptidases and inhibitors [BR:
ghi01002
]
Cysteine peptidases
Family C48: Ulp1 endopeptidase family
107913106
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
107913106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C48
Motif
Other DBs
NCBI-GeneID:
107913106
NCBI-ProteinID:
XP_016697049
UniProt:
A0A1U8K8T0
LinkDB
All DBs
Position
D05:complement(20086498..20095921)
Genome browser
AA seq
1018 aa
AA seq
DB search
MDNIPCLDVDAVDGDCSCDVTTPVASLGSDEKDCILKEGNPKLNVSPESKSTHSEQQADL
AKDSHEPRCTFTDMDPRDSCPEVPSPGKRQLNCALSNSPLINKPVDMASDANESMAERSP
TSPSSDVAEDDVSLNGDMSDHCFGDIPMDNLERTVVICPDYVLYQNDYHTGVSVIFSPSG
VKIEGSTVSEHQRTFSFESTIDDIISINCRWFQRVGYMTLKMKVLSKVVIEAENACDTSA
DEELKFTVIDPRWSEKHAAIMSLNFQYQALWNIMPDPLVEMDGDDSLVQRSYFPNFDEPF
EEVIYPKGDIDAVSISKRDVDLLLPETFVNDTIIDFYIKYLKNQIQPEERLRFHFFNSFF
FRKLADLDKDPSSISDGRAAFLRVRKWTRKLDMFGKDYIFIPVNFSLHWSLIVICHPGEV
AGFKDEDLDKSSKVPCILHMDSIKGNHAGLKNLVQSYLWEEWKERHKETSEDLSSKFLNL
RFVSLELPQQENSFDCGLFLLHYLELFLAEAPPNFNPFKITKFSNFLNLDWFLPTEASLK
RTLIQKLIFELLEIRSREMSSSDCSEEPHSSRFPEEIGNGGVEFVSKSVSPEVACHGNLN
PQASQGIEMTLLASSSMRNVETVNDSGLVLREFFEPGVTAGSLLGQFQSFDQQPSYYNMN
GAVSPREQEDVQTGQQFVYLASGETSFPQFTGITSQACEVPYSSSGFVMGSSWNPGISLR
GGNKVDTSHETSCTSDDGDDIGIIENNPIEDSVVLIEKRDTDQEQSESVENVECLKKGFM
PASIEVLETSITDVPGASEDTDKIHDKTGDADLPSKAHSSVVLHQNPGAAVNELDVDPEM
VENMESQDNKTVSSDQTLGTVLNQLDRDSNLIENEASCDEVQTIIDDLPSKDNSMLLSDQ
NPSMVAEALNQDSEVAENKEAIVNDSLAELSEQPAAKRMQQLNQDSEVAENKEAIVNDSL
AELSEQLAAKRMQQLNQDSEVAENKEAIIVNDSLAELSEQPAAKRMRLSPSLEEEVDS
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggacaacattccctgtttagatgttgatgcagttgacggtgattgtagttgtgatgtt
actacccctgttgcctcgctgggtagtgatgaaaaggattgcatcttaaaggaaggaaat
cccaaactgaatgtttccccagagtcaaagtctacgcattctgaacaacaggcagactta
gcaaaagatagccatgagcctagatgtacctttactgatatggatccaagagattcatgt
cctgaagtaccttcacctggaaaaagacaattaaactgtgccctttctaattctccatta
attaataagccagttgatatggcttcagatgctaatgaaagcatggctgaaagatctcca
actagtccttcttcagatgtagcagaggatgatgtttctttgaatggcgacatgtcagac
cattgctttggcgatatccctatggataacttagagaggacagttgttatctgtccggat
tatgttctatatcaaaatgattatcatacaggtgtctcagtcattttttctcctagtggt
gtcaaaattgagggctcaactgtgagtgaacaccaaagaacctttagtttcgaaagcaca
attgatgatattattagtatcaattgtcggtggtttcaaagggttggatatatgacatta
aagatgaaagtcctatccaaggttgtgatagaggctgagaatgcatgtgacacttcagcc
gatgaggagttgaaatttacagttattgaccccagatggtccgagaaacatgcagcaatc
atgtcattaaattttcaataccaggccttatggaatattatgccagatccacttgtagaa
atggatggagatgattcacttgtacaaaggtcctattttcccaattttgacgagcctttt
gaggaggttatatatccaaaaggtgatattgatgcagtttccattagcaagagagatgtt
gatctgttactaccagagacatttgtcaatgatactatcattgacttctacatcaagtat
ctgaagaatcaaattcaacctgaggaaaggctgagatttcacttttttaacagttttttc
tttcggaaacttgctgaccttgacaaagatccatccagtatttcggatggcagggctgct
ttccttcgcgttcgtaaatggacaaggaaattggatatgtttggaaaagattacatcttt
attcctgtaaatttcagtcttcattggagtttgatagtcatatgccatcctggtgaagta
gctggttttaaagatgaagacttggacaagtcatccaaagtaccatgcatattgcatatg
gactctatcaaaggaaatcatgcaggtcttaaaaatcttgtccaaagttacctttgggaa
gaatggaaagagaggcacaaggagacatctgaagatctttcttcaaaattcttgaatctg
cggtttgtctcacttgagctgccacagcaggagaattcatttgattgtggtctgttctta
ctccactatctggagctctttttagctgaagctcctcctaacttcaatccattcaaaata
accaagttctccaactttcttaatttggattggttcctacctactgaggcatctctaaag
cgcactctcatccagaagttaatctttgaactcctagagatccgttctcgggaaatgagt
tcatctgattgcagtgaagaacctcattcctctagatttccagaagagattggaaatgga
ggtgtggagtttgtttcaaagagtgtcagcccagaagtagcttgtcatgggaatttaaat
ccccaagcaagccaagggattgaaatgactctgttagcatcgtcttctatgagaaatgtg
gagactgttaatgattctggcttggttcttagggagttctttgagcctggtgttaccgca
ggatctttgcttggacaatttcaatcttttgaccagcagccttcatattacaatatgaat
ggagctgtatcacctagagagcaagaagacgtgcaaactggtcaacagtttgtatatttg
gcttctggagaaaccagttttccgcagttcactggaatcacgtctcaagcgtgtgaagtt
ccatattcatcgagtggttttgtcatgggcagttcatggaatcctggaatttccttgaga
ggagggaacaaagttgacacatcgcatgaaacatcttgtacctctgatgatggcgatgat
attgggattattgaaaataacccgattgaggatagtgtagttctgattgaaaaacgggat
acagatcaggaacaatctgagtcagtagaaaatgttgagtgtctgaagaaaggtttcatg
cccgcctccattgaggtgctggagacttctatcaccgatgtccctggagcttctgaggac
actgacaagattcatgataaaactggagatgcagatcttccttcgaaagctcactcgtct
gttgtgttgcatcaaaatcctggtgcagcagtgaacgagttagatgtggatcccgaaatg
gttgagaacatggagtcccaagataataaaactgtgtcatcagatcaaactcttggtacg
gtgctgaaccagttggatcgggattccaacctgattgaaaacgaggctagttgtgatgaa
gtgcaaacaattattgacgacctaccgtctaaagataactcaatgttattatcagatcaa
aatcctagtatggtggctgaagcattgaatcaagattctgaagtggctgaaaacaaggag
gctattgtcaatgattctcttgcagagttatctgagcaaccggcagcaaagaggatgcaa
caattgaatcaagattctgaagtggctgaaaacaaggaggctatcgtcaatgattctctt
gcagaattatctgagcaactggcagcaaagaggatgcaacaattgaatcaagattctgaa
gtggctgaaaacaaggaggccatcattgtcaatgattctctggcagagttatccgagcaa
ccagcagcaaagaggatgcggctttcgccatcccttgaggaggaagtggactcctag
DBGET
integrated database retrieval system
