Gossypium hirsutum (upland cotton): 107913199
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Entry
107913199 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: protein TRI1
KO
K15223
upstream activation factor subunit UAF30
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107913199
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
107913199
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
Vma22_CCDC115
RR_TM4-6
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
107913199
NCBI-ProteinID:
XP_040959853
UniProt:
A0ABM3AYI2
LinkDB
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Position
D11:24273263..24277883
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AA seq
333 aa
AA seq
DB search
MVLDSELIARLWEFLGESDLNTTTTAIVRRRLEEDFGIDLTDRKKFIREQVDLYLQNQFE
NAEEQQQQQQNEDDQTAKIKSEETDGSDSDDEEEEHERAKNKKATSKKRIRSKGVNSEGK
RRGGGFNKVSRLSPQLRELLGVPEMARTEVVKQMWVYIREKNLQDPVNKXNIICDEPLHA
LFGVESIDMFQMNKALSKHILPLDSDEVKSMEREKPRKHEREEVKSTEKEKPRKHEREED
PDEAKGKEKRQKGFLAPLQLSDALVKFLGTGENELTRAVVIKRMWDYIKENNLQDPADKR
KVICDEKLKELFEVETFHGFTVTKLLAAHFLKS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggtcttggactcggagctaatcgcccgactctgggagttcttgggtgaatcggacctc
aacaccacaactacagcaatcgtgcggcggagattggaggaagatttcggtattgatttg
acggacaggaagaagtttattagggaacaggtcgatttatatctccaaaaccagttcgaa
aatgccgaagaacaacaacaacaacaacaaaatgaagatgatcagacggctaagattaaa
tcagaggaaaccgacggctctgattcggacgacgaagaggaggagcacgaaagagcgaag
aacaaaaaggctacctcaaagaaacggataaggtcaaaaggagtcaatagtgaaggtaag
agaagaggaggtggttttaacaaagtaagcagactttccccacaacttcgggaactttta
ggagtccctgaaatggcgaggactgaggtggtcaagcaaatgtgggtttatattagagag
aaaaatttgcaagacccagttaacaagnaaaatataatttgtgacgagccattgcatgca
ctttttggtgttgaatccattgacatgtttcaaatgaacaaagccctgtcaaagcacatc
ttgcccttggattcagacgaagtcaagtcaatggagagggaaaaaccaagaaagcatgag
agagaagaagtcaagtcaacggagaaggaaaagccaagaaagcatgagagagaagaagat
ccagatgaagcaaaaggaaaggaaaagcgacagaagggatttcttgctcctcttcaactt
tcagatgctctggtaaaatttcttggtactggagaaaatgagcttacacgggctgtcgtg
atcaagagaatgtgggattacataaaagaaaataacctccaggatccagctgacaagagg
aaagtaatatgtgacgagaagctgaaagagctgttcgaggttgaaaccttccatgggttc
acagttacaaaactcttggctgctcattttctcaagagttga
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