Gossypium hirsutum (upland cotton): 107913246
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Entry
107913246 CDS
T04793
Name
(RefSeq) RNA-binding protein Musashi homolog 2 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107913246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107913246
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107913246
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
107913246
NCBI-ProteinID:
XP_016697258
UniProt:
A0A1U8K8G5
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All DBs
Position
D11:complement(25110566..25114848)
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AA seq
357 aa
AA seq
DB search
MERKLVVLGIPWEVDTEGLREYMSKYGDLEDCIVMKERTTGRSRGFGYVTFASADDAKNV
LSIEHFLGERMLEVKIATPKEEMRAPVKKVTRIFVARIPPSVDESTFRRHFEEYGEITDL
YMPKDQVSKAHRGIGFITFASAESVENLMADAHELGGSTVVVDRATPKEDDLKPIGRMSQ
GGYGAYNAYISAATRYAAVGAPTLYDHPGPMYGIGGESSRGMGKKIFVGRLPQEATADDL
RLYFGRFGRIIDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP
VDDAGPSFMMNPAGPFRGFGGPMRPFGRMYGGLPYDDWGYAIGSGRPSRADWRYRPY
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggaacggaagcttgtggttttgggaatcccttgggaggtggatactgaaggtttgagg
gaatacatgagtaaatatggtgatttggaggattgtattgtcatgaaggagcgaactacg
ggccgatcccgtggttttggttatgtaacgtttgcatcggctgatgatgcgaagaatgtg
ctatcaattgagcattttcttggtgagagaatgttggaagttaaaatagctactccaaag
gaggagatgagagcacccgtaaagaaagttaccaggatatttgtggccaggattccacca
tcagtggatgaatcaacctttcggaggcattttgaggagtatggtgagataacagattta
tacatgccgaaggatcaagtctcaaaagctcaccgtggaattggctttatcacttttgct
agcgcagaatctgtggagaatctgatggctgatgctcatgaactgggtggttctacagta
gtagttgatcgagcaacacctaaggaagatgacttaaagccaataggcagaatgtcacag
ggggggtatggtgcatacaatgcttacatttctgctgccactaggtatgctgcagttggt
gctcctaccttgtatgaccatcctggccccatgtatggaataggaggggagtccagccga
gggatgggcaaaaagatatttgttggcagacttcctcaggaggccactgctgatgatctg
cgtctgtattttggtagatttggccgtataatagacgtttatgttcctaaggaccccaag
agatctggccacagaggttttggttttgtgacttttgctgaagatggagttgcagataga
gtatctcgtaggtctcacgagatttgtggacaacaggtggcaatagattcagcaacaccc
gttgatgatgctggccctagtttcatgatgaatcctgctggaccatttagaggttttggt
ggtccaatgcgcccctttggtaggatgtatggaggactgccttatgatgattggggttat
gcaattgggagcgggaggccatcgagagcagattggcggtacaggccatactaa
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