Gossypium hirsutum (upland cotton): 107913338
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Entry
107913338 CDS
T04793
Name
(RefSeq) peroxisome biogenesis protein 6-like
KO
K13339
peroxin-6
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107913338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107913338
Membrane trafficking [BR:
ghi04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
107913338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_5
RuvB_N
AAA_22
AAA_18
Rad17
nSTAND3
AAA_lid_3
AAA_17
NPHP3_N
AAA_33
AAA_28
RNA_helicase
DUF815
TIP49
AAA_14
AAA_7
TsaE
Parvo_NS1
Mg_chelatase
ATPase
IstB_IS21
AAA_25
PEX6_4th
Vps4_C
MCM
AAA_2
AAA_24
PhoH
zf-C2H2_3rep
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
107913338
NCBI-ProteinID:
XP_016697384
UniProt:
A0A1U8K9S3
LinkDB
All DBs
Position
D08:12229890..12241786
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AA seq
930 aa
AA seq
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MMVGRRKPLVLSSTKILVNSVLSSTRLNEAGPANLSGDGLRLKAGILRVSKVKNSISDPK
LASLDDSALIGLSTSTLKRLSITSGSLVLVRNLEAKIQRVAQIVVLDCPNTHVHMSLRKE
SLSDPPHVMLVFPSYSYPCTGSVSLDCDVAYVSPLLAFNLNLHISCLRSLVYKGTETLAY
LFEANVDDKACRGDTDISLWLEPLGGPPKYASHLRVSFVKMPECSSLESLRGISSIEADD
RQEMIDSALHKYFEVDRYLTRGDVFSVFLNWNCNSAICIPCCSRLQNQSDDIIYFKVVAV
EPSDEAILRVNRTQTALVLGGSVSSAVPPDLLISGPKSVAPLQGDTVKILASILTPPLCP
SPLSLKFRVSVLLHGLPGCGKRTVVRYVSKRLGLHVVEYSCHDLTASSEKKTSAALTQAF
NSSQRYSPTILLLRHFDVFRNFASHEGLPSDQIGLSSEFASVIRKFTEPVASDEDGNAED
MSNVEFAVKDSGNVGRHEVLLVAAADSSEGLPPAIRRCFSHEVSMGPLTEEQRAEMLSQS
MQGVSELLSDTRLEDFVKDIVGQTSGFMPRDLCALVADTGANLISKSNFQTGKAESSQSD
DSVGVKAVQDTSSNTTARLRGKEDLEKALERSKKRTASALGAPKVPNVKWEDVGGLEDVK
KSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL
INMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEI
DGLNDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTRKFRL
HEDISLYSIAKRCPPNFTGADMYALCADAWFHAAKRKVLSPDSSSMDQADSIVVEYDDFV
KVLRELSPSLSMAELKKYEILRDQLEGSSS
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgatggtggggagaaggaagccgcttgtgctctcttccaccaaaattctcgtcaactcg
gtactaagttccacgcgactcaatgaagccggtccagctaacctttccggtgacggtttg
cgtttgaaggcggggattctaagggtttcgaaggtcaaaaatagtatttcggatcctaag
ttagcttcacttgacgattctgctttgatagggctctctacttctacattgaagagacta
tccataacttctggctcgctggtgcttgttagaaacttggaggcaaagatacaaagagtt
gctcagattgttgttttagattgtccaaatactcacgttcacatgtctctaagaaaagaa
tccctttcagatcctccgcatgtaatgcttgtctttccctcatacagttatccttgtact
ggttctgtatccttggactgtgatgttgcctatgtatctcctctgttagcttttaacctc
aacctacacatatcatgcttgagatctcttgtctataaaggaacggagactttagcatac
ctctttgaagctaatgtggatgataaggcatgcaggggagacactgatatcagtttatgg
ttggaacctttggggggcccgccgaagtatgcatcacacttaagggtttcctttgttaag
atgccagaatgcagttcccttgaatctttaagaggaatttcttctattgaagccgatgat
cgccaagaaatgattgattctgccttacacaagtactttgaagtggatagatatttaaca
aggggagatgttttcagcgttttcctaaattggaattgcaattcagccatttgcattcct
tgctgctcaagattgcaaaatcagagtgatgatatcatctattttaaggttgttgctgtg
gagccatcagatgaagccattcttcgagtaaatcgtactcagactgctctagttcttgga
gggagtgtgtcatctgctgttccccctgatttgttaatttctggtccaaaaagtgttgca
cctctgcaaggggacacagtcaagattttagcttcgattctcacaccacctctatgccca
tccccactatctttgaaatttagagtttctgttctactacatggtctgccagggtgtggg
aagaggactgttgttagatatgtttctaagcgactgggtctacatgtagttgaatatagc
tgccacgacctaacagcctcttctgagaagaagacctctgctgctttgactcaagctttc
aacagttcgcaaagatactcaccaacaatacttcttctacgccattttgatgtttttcgg
aattttgcctcccatgaaggtttgccaagtgaccaaattggactttcctctgaatttgca
tcagtcatcagaaagtttactgagccagttgctagtgatgaagacggcaatgcggaagac
atgtcaaacgttgaatttgctgtaaaggacagtggaaatgtgggtaggcacgaggtgctg
ttggttgcagctgctgacagttctgaaggtctgccaccagctattaggcgttgtttcagc
catgaagtaagcatgggtcccttgactgaagaacaaagggctgaaatgttgtcacagtca
atgcaaggtgtttctgaacttctttctgatactcgcttagaggattttgtgaaggacata
gtgggacagacttctggcttcatgcctcgggatttgtgtgctttagttgctgatactggt
gctaacttaatctccaagagcaattttcaaactggcaaagcagaatcatcacaatcagat
gattctgttggagttaaagcagtgcaggatacatcaagcaatactacagctcgcttaagg
ggaaaagaggacttggagaaagcattggagcgatcaaagaagaggactgcatctgcatta
ggtgctccaaaggttcctaatgtgaaatgggaagatgttggtggactggaggatgtgaaa
aaatcaattttggacactgttcagttacctctcctgcataaggatttattttcatctggc
ttgcgcaagcgctctggtgtccttctttatggtcctccaggaacagggaaaactttgttg
gcaaaagctgtggcaactgagtgttccttaaatttccttagtgtaaaagggcctgaacta
attaacatgtacataggagagtcagagaagaatgttcgagacattttccagaaggccaga
tcagcacggccatgtgtcatcttctttgatgaactcgattcgcttgctcctgctcgaggt
gcttctggagattctgggggtgttatggacagagtggtctctcagatgcttgcagagatt
gatggccttaatgattctacccaggacctatttattataggagcaagcaacaggccagat
cttattgacccagctcttctaaggcctggtagatttgacaaactgctatacgttggagtt
aactctgatgcatcttacagagagcgagttcttaaagcacttaccagaaagtttagattg
cacgaagatatatccctctactcaattgcaaagagatgcccaccaaactttactggtgca
gatatgtatgccttgtgtgcagatgcttggtttcatgctgcaaagcgtaaggtgttgagt
ccagattcatcttccatggatcaagctgactccattgttgtagaatatgatgactttgtg
aaggtattgagagagctttcaccatccctttccatggcagagcttaagaagtacgaaatt
cttcgagatcagttggaagggtcttcaagctga
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