KEGG   Gossypium hirsutum (upland cotton): 107913421
Entry
107913421         CDS       T04793                                 
Name
(RefSeq) snurportin-1
  KO
K13151  snurportin-1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107913421
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    107913421
Spliceosome [BR:ghi03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    107913421
SSDB
Motif
Pfam: SPN1_m3Gcap_bd Aft1_HRR mRNA_cap_enzyme Snurportin1
Other DBs
NCBI-GeneID: 107913421
NCBI-ProteinID: XP_016697485
UniProt: A0A1U8K4P6
LinkDB
Position
A12:99804456..99809121
AA seq 422 aa
MAPHDIRRPFKRAAISDQQKRRELSLLRQAQNRRDAQQQARCLASSILSLQSAAPESQPE
QSDTEIETVPESEQESEAFSKDLDVRQASKLRGPEVRKWFARQLMLPEWMIDVPDRLAQD
WYVFARPAGKRCFVVSSNGTTVSRQRNGSILHHFPSALPAGAKIRDGSGSAQSYCILDCI
FHELDQTYYVIDMVCWNGYSLYDCTAEFRFYWLNSKLEESGACNAPSHYHKFRFSAVPVY
NCDSSGLYSAYTGVVPYAKDGLLFYNKHALYQTGNTPLALVWKDENCSQYVIDTDGKGEI
PSQQQVVLELQDDRKLVTSDDPPVLFGCLDGDIIEKSGLHTGNLLRFAIGDGGLSFADGK
LEKADLIYLGKSNRARAFADSYSKVLFQFMVRHSPLKIDDLLASINSANDQEKTPSDIEM
VG
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcgccgcacgacattcgccgtccgttcaagcgagcggctatatccgatcagcagaag
cggagggagctctcgctgctccgtcaagcgcagaatcgtcgcgatgctcaacagcaagct
cgctgcttggcttcatctattctctcgctccagtctgctgcacccgaatcccaacccgaa
caatccgacaccgaaatagaaaccgtacccgaatccgaacaagaatctgaagctttttcg
aaagacctcgatgtccgtcaagcttcgaagctccgaggaccagaggttcgaaaatggttc
gcgaggcagcttatgcttcctgagtggatgatcgacgtccctgatcgcttggcgcaggac
tggtatgtatttgcaaggccagctggaaagcgatgctttgtggtttcatcaaacggaacg
acagtgagcaggcaaagaaacggctccattttgcatcatttcccatcggccttaccagct
ggagccaagatcagagatggctcgggttcagctcaatcatattgtatcctggattgcatt
ttccacgagttggatcagacttactatgtgattgatatggtttgttggaatggatactct
ctctatgattgtactgctgagtttagattctattggttgaactcgaagctcgaagagagc
ggtgcttgcaatgcaccttcacattatcataaatttaggttcagtgctgttccagtgtat
aattgtgattcgagtggcctatattcagcatacactggagttgtgccatatgctaaggat
ggattactgttttataacaagcatgcactctatcaaactggcaatacacctctagcatta
gtctggaaggatgaaaactgtagtcaatatgttattgacactgatggtaaaggagagatt
ccaagccaacaacaggtagttttggagctgcaagatgatagaaaactggtaacatcagat
gaccctcccgtgctgtttggctgcttagacggggatataatagaaaagtcagggctgcat
acagggaaccttttacggtttgctattggtgatggaggattgagttttgcagatgggaag
cttgagaaggctgatttgatttatcttggcaagtccaaccgggcacgtgcttttgcagat
agttactcaaaggttttgttccagttcatggttcgacattctcctctaaagatagatgat
cttctagcatcaattaactccgcaaatgatcaagaaaagacaccaagtgacatcgagatg
gttggttga

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