Gossypium hirsutum (upland cotton): 107913566
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Entry
107913566 CDS
T04793
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107913566
Spliceosome [BR:
ghi03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107913566
Other components
Complex C specific factors
107913566
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
107913566
NCBI-ProteinID:
XP_016697689
UniProt:
A0A1U8KAM6
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Position
D11:47925844..47929356
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AA seq
853 aa
AA seq
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MDEYQEMERFGMENDFEDAQWIDGEFYYKKRKEKRTQTKDDVIYGVFASDTDSEDGGSSS
SRKRRKEFGKKADLTKPVNFVSTGTVMPTQEIDNNSKVENDNSVRDDNGDDSRPGLGSGV
GLGFGGNDSLPKSDGNVVADEDGDTSFLPTAFGRKIKEGAQRREKERERLKMEKKSLGGR
REAGGGNGDVGSFEKHTKGIGMKLLEKMGYKGGGLGKNEQGIVAPIEAKMRPKNMGMGFN
DFKEAKLPGLQQLEEKKSVSQQPVGKAKERLWSKNAKGRKKEEYITVEELLAKKQEEGVE
IVQKVIDMRGPQVRVLTNLENLDAEEKARENDVPMPELQHNLKLIVDLAELDIQKIDRDL
RNEKETALSLQKEKEKLEIEASHQKQHLANMEQIVSVLGQIEEENSSGKLTLESLANSFR
DLQKNYADDYKLCNLSCIACSLALPLFIRMFQGWDPLVNPSYRMEVISAWKDLLQIDGSY
DIWEDVATPYCQLISEVVLPAVRISGINTWEPRNPEPMLGFLESWEKLLPSPILQIILDT
VVMPKLSRAVDSWNPRKETVPIHVWVHPWLPMLGPKLEGLYQTIRMKLSNVLDAWHPSDP
SAYAILSPWKTVFDSVSWEQLMRQYIVPKLQIALQEFQINPADQKLDQFYWVMSWASAIP
IHLMVDLMEKFFFVKWLQVLYHWLCSKPDFEEIKNWYMGWKGLLPQELLANESIRNQLNC
GLEMMVQAADHVPVVQPGLRENVTYLKVREQRQFEAQQRAAAHAQQPAAAQMDGVPEMSL
KEVVEAYAQQHELLFKPKPGRMHNGQQIYGFGNISVIVDSLNQKIFAQKDNGWSLVSLDD
LLKMHYNSLARRR
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatatcaagagatggaaaggtttgggatggagaacgattttgaagacgcacaa
tggatagacggcgaattctactacaaaaagcgcaaagaaaaacggactcagacaaaagat
gatgttatttatggtgtttttgcatctgataccgactctgaagacggtggttcttcttca
tcaaggaagagaaggaaagaattcgggaagaaagccgacttgacgaagcctgtcaacttt
gtttctacaggtactgtaatgcctacccaagaaatcgataataattctaaggtagagaac
gataatagtgttcgggatgataatggggatgatagcaggcctggattggggtctggcgta
ggtttagggtttggtggaaatgatagcttgcccaaaagtgatggtaatgttgttgctgat
gaggatggtgatactagttttttgcctactgcctttgggaggaagataaaggaaggggca
caaaggagagagaaagagagggagaggttgaaaatggagaagaaaagcttaggaggcaga
agggaggctggaggtggtaatggtgatgttgggtctttcgagaagcatactaagggtatt
gggatgaagttgcttgagaaaatggggtataaaggaggtggtcttgggaagaatgagcaa
ggaattgttgcacctattgaggcaaagatgaggcctaagaatatggggatggggtttaat
gattttaaggaggctaagttgccagggttgcagcagttggaagagaagaaaagtgtgagc
cagcagcctgttgggaaagcaaaggagaggctttggtcgaagaatgcaaaggggaggaaa
aaggaggagtatattacagtggaagagttgttagcaaagaagcaagaagagggtgttgag
attgttcagaaggtgattgatatgagggggccacaagtaagagttttaaccaacttggag
aatctagatgctgaagagaaggcaagagagaatgatgttccgatgcccgagttgcagcat
aatttgaagttaattgttgacttggcagagcttgatattcagaagattgatagggattta
aggaatgaaaaagagacagcattgagcttgcaaaaggagaaggaaaagttggagattgag
gcttcacatcagaagcaacatttggctaatatggagcaaattgttagtgtgcttggccag
attgaggaagagaactcatctgggaaattgaccttggagtcccttgcaaatagttttagg
gatttgcagaaaaattatgctgatgattacaaattgtgtaacttgtcctgcattgcatgt
tcattagctttgcctctgtttataagaatgtttcagggttgggatcctcttgtgaatcca
tcttacaggatggaggtgatatcagcatggaaggatttattgcaaatagatggtagttat
gacatttgggaggatgtagcaacaccttattgtcagttgatctcggaagttgttttacca
gctgtgaggatatctggcataaacacatgggagcctaggaaccctgaaccaatgcttgga
tttttggaatcatgggaaaagttacttccgtcacctattcttcagatcatattggatact
gtggtaatgccgaaattgtcaagagcagttgactcatggaatccccgtaaggaaactgtt
ccaatccatgtctgggttcatccatggttgccaatgttggggccgaagttggagggcttg
tatcaaaccatacgtatgaagttgagtaatgttcttgatgcttggcacccaagtgatcca
tctgcttatgctatactatcaccttggaagactgtttttgattcagtgagttgggaacaa
cttatgcgccaatatatagtccccaagttgcagattgctctgcaggagttccaaataaac
cctgcagatcagaagcttgatcagttttattgggttatgtcttgggcctctgcaattccc
attcatctcatggttgatttgatggagaaatttttctttgtaaagtggctgcaggttttg
tatcattggttgtgctcaaaacccgactttgaggagataaaaaattggtacatgggttgg
aagggacttctgccacaggagcttttggctaatgaaagcatccgcaatcaacttaactgt
ggtcttgagatgatggttcaggctgctgaccatgtaccagtagtgcagcctggtttgagg
gagaatgttacgtatcttaaggtgcgtgagcagaggcagtttgaggctcagcagagagca
gccgcacatgcacaacaaccagctgcagcccagatggatggtgttcctgagatgagtttg
aaggaggtagttgaggcctatgcacagcagcatgagttactattcaagcccaagcctgga
aggatgcataatggtcaacagatatatggcttcggtaacataagtgtaatagttgattca
cttaaccagaaaatttttgcccaaaaggataatggctggtccctggtctcacttgatgat
ttgttgaaaatgcactataattctcttgcgaggagacgttga
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