Gossypium hirsutum (upland cotton): 107913591
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Entry
107913591 CDS
T04793
Name
(RefSeq) chromatin assembly factor 1 subunit FAS2
KO
K10751
chromatin assembly factor 1 subunit B
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107913591
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
107913591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WDR55
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
B-prop_COPA_B_2nd
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_EIPR1
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
107913591
NCBI-ProteinID:
XP_016697714
UniProt:
A0A1U8KAQ2
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Position
D11:complement(46987048..46991259)
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AA seq
452 aa
AA seq
DB search
MKGGTVQINWHDTKPVLTLDFHPISGLLATGGADFDIKLWVINSGQVQKKIPTASYQNSL
SYHGSAVNALRFSPSGEQLASGADGGELIIWKLHTTETGQSWKVFKSLLFHRKDVLDLQW
STDGAFLISGSVDNYCIIWDVNKGSVHQILDGHFHYVQGVAWDPLSKYVASLSSDRTCQI
YINKPKSKTKGAEKLNYICQHTIMKAEQQPIDDAKSVKNHLFHDETLPSFFRRLAWSPDG
SFLLVPAGSYKMSTPSETINTTYVFSRKDLSRPSLQLPCANKPVVAVRFCPLAFNLRGSN
PAGFFKLPYRLVFAVATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSYDARYLALSSQ
DGYCTLVEFEKEEQGVPIPLAEPKIMNVEGTSSIVQKPDDVVIEVNDPVTVDNRTVECAE
KREGKQASPSLANTPIVNKPAKRRITPMAIDP
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggagggacagttcaaataaattggcacgacaccaagcccgtcttaaccctagac
ttccaccccatctccggtcttctcgccaccggcggcgctgatttcgatatcaagctatgg
gttattaattcaggccaagtacagaagaaaatcccaactgcttcatatcaaaatagtctt
tcttaccatggctccgctgttaatgcccttcgcttctctccctccggggaacaacttgcc
tctggggctgatgggggtgagctgatcatatggaaattgcacactacagaaactggtcaa
agttggaaagttttcaagagtttgttatttcaccgtaaagatgttctagatttgcaatgg
tcaactgatggcgcatttctcatctctggatctgttgacaattattgtatcatatgggac
gttaacaaaggttctgtccatcagatattagatggtcatttccattatgttcaaggtgtt
gcatgggatcccttgtccaagtatgttgcttctctcagttcagataggacttgccagatt
tatatcaataagcccaaatcaaaaacaaagggtgctgagaagttgaactatatttgtcag
cataccatcatgaaggcagaacagcagccaatagatgatgctaagtcagtaaaaaaccat
ctttttcatgacgaaacactgccatcattcttccgtcgattagcttggtcgcctgatgga
tcatttttactagtgcctgcaggttcttataaaatgtcaactccatctgaaacaataaac
accacttatgtcttttccagaaaagacctgtcaagaccttctttgcagctcccttgtgct
aacaaaccagttgttgcagtccgtttctgccctttagctttcaaccttcgaggatctaac
ccagctggttttttcaagcttccttatcgacttgtatttgctgttgcaactttgaattca
ttgtatatttacgatactgagagtgttcctccaatagcaattttggctggtcttcactat
gcagccataactgacattgcatggtcatatgatgcacgatatttagcattgtcatctcaa
gatggttactgtacattggtagaatttgagaaggaagaacagggagtacccattcctcta
gcagaacctaaaataatgaacgttgagggtacgagctctattgtccagaaacctgatgac
gtggtgattgaagttaatgatccagtcacggtagataacaggacggtagaatgtgcagaa
aagagagaagggaaacaggcatcgccaagtttggcaaatactcccatcgtaaataagcca
gccaagaggcgtatcactccgatggcaattgatccatga
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