Gossypium hirsutum (upland cotton): 107913676
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Entry
107913676 CDS
T04793
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107913676
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107913676
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
TEX13
Stathmin
Motif
Other DBs
NCBI-GeneID:
107913676
NCBI-ProteinID:
XP_016697817
UniProt:
A0A1U8K5R6
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Position
D11:38593313..38604737
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AA seq
584 aa
AA seq
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MQAIDSSRSSNPFILCISSNLEIPLFAFSVGSTFYSFSTSGFKDPSPLQFGVFGGCGMNS
IFSEQILADKLSKLNSTQQCIETLSHWCIFHQSNAELVVATWDKQFHNSEMAQKVPLLYL
ANDILQNSKRKGNEFVNEFWKVLPAALKDLLENGDDRGKNVVSRLVGIWEERRVFGSRAR
SLKDVMLGEEVPLPLELSKKRPRSASVRIVKRDSRSIKTKLSIGGTAEKIVSAFHLILSE
QPNEDEEMSKCKSAVHRVRKMEKDVDVACSIAKDPKRKTLSKELEEEENLLKECIEKLKS
VEANRAALVSQLKEALHEQESELENVRTQMQVAQAQADEAFNMRKHLSDEDYVSMSSATT
VLSIDANAKAGETPKRSAAAIAAEVADKLAASSSSQMIMHSVLSTFAAEEAKNVGLTKAS
TQSNSLNSVTDAISKSEKSLPVADSTALMPTQPLCAPINHSYQSVLVPQPAMQSQTTSSQ
PQYHMLPNIAAQQFLQSSGGTLTPYGTYGGMPPLPPGPPPPPPYMVSPMLPLPITQQQPI
PSGQQTASLTQQQLLPVTQQPPVPPSFRPLQPPGMVYYGHPPHS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccattgattcttcacgcagttcgaatcctttcatcctctgcatttcctcaaac
ttggaaatacccttatttgctttctcagttggatccactttttattccttttccacttcg
gggtttaaagatccaagtccacttcaatttggggtttttggtgggtgtgggatgaatagt
atattcagtgaacagatacttgcagataagctttccaagctcaacagcactcaacagtgt
attgaaacattgtcacattggtgtatatttcaccaaagtaacgcagaactggttgttgca
acatgggataaacagtttcacaactcagagatggctcagaaagtccccttgttgtacctt
gccaatgatattctgcagaacagcaagcgtaaaggaaatgaatttgttaatgagttctgg
aaagtccttcctgcagccttgaaggaccttcttgagaatggtgatgatcgcgggaagaat
gtggtttccagattggtaggtatatgggaagaacgaagagtatttgggtcccgagcacga
agcctaaaagatgtgatgcttggtgaagaagtgcctctgccattggaattaagcaaaaag
cgtccacgctctgcatctgtcagaattgtgaagcgggactcaagatccattaaaacgaag
ttgtcaattgggggcacagctgaaaaaatagtttcagcatttcatttgatactcagtgaa
cagccaaatgaggatgaagagatgagcaagtgcaagtcagcagttcatcgagtgaggaag
atggaaaaagatgtggatgttgcctgttcaattgcaaaggatccaaaacggaaaaccttg
tccaaagaacttgaagaagaagaaaatcttctgaaagaatgcattgagaaactcaagtct
gtggaagcaaatagagcagcacttgtatcacagttaaaagaagctcttcatgaacaggaa
tcagagttagagaatgttcgtacacagatgcaggtagcacaagcacaggcggacgaagcc
tttaacatgcggaagcatctcagtgatgaggattatgtttcaatgtcatctgctacaacg
gtcctatcaattgacgccaatgcaaaagctggagaaacacctaagcggagtgctgcagcc
attgcagctgaggttgcagacaagcttgctgcttctagctcctctcagatgatcatgcat
tctgttctctctacatttgcagctgaagaagccaaaaatgttggtctaacaaaggcgtcc
acacagtcaaactccctcaattctgtcaccgatgcaatttcaaaatcagagaagtcactg
ccagttgcagattctactgctcttatgccaacacaaccactatgtgctccaataaaccat
tcttatcaatccgttcttgtgcctcaaccggccatgcaaagccaaaccacttcctctcag
cctcaatatcacatgcttcctaacatagctgcacaacaatttttgcagtcatcagggggg
acactaaccccatatggtacatatggtggtatgccacctttgccacctggaccaccacca
ccgcctccctacatggttagtccaatgttaccattgccaataactcagcagcagccaata
ccatccggtcagcaaacggcctctttgactcagcagcaactgctgcctgtaactcagcaa
ccacctgtacctcccagtttccggcctcttcagccaccgggaatggtgtactatggtcat
ccgcctcattcgtag
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