Gossypium hirsutum (upland cotton): 107913725
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Entry
107913725 CDS
T04793
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107913725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107913725
Spliceosome [BR:
ghi03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
107913725
Complex B
107913725
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_10
RRM_YTH1
xRRM
DUF4523
RRM_PARP14_3
DUF1866
Calcipressin
Motif
Other DBs
NCBI-GeneID:
107913725
NCBI-ProteinID:
XP_016697880
UniProt:
A0A1U8K5V2
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All DBs
Position
D08:complement(12945276..12947928)
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AA seq
243 aa
AA seq
DB search
MAEISQDEEIPPNMTLYINNLNEKIKIDQLKKSLHAVFSQFGKILDVLAFKTLKHKGQAW
VIFEDVNSATNALRRMQGFPFYDKEMRIQYAKTKSDIIAKADGTFVPREKRKRHDEKGGK
KRKEQLDPNQAAAGLNPSYAGAYGATPPLSQIPYLGARPIVPEAPAPPNNILFVQNLPHD
ATAMMLQMLFNQYPGLKDVRMVEAKPGIAFVEYENEMQSTVAMQALQGFKIQQNQMLITY
AKK
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcggagattagtcaggatgaagaaattcctcccaatatgacattatacatcaacaat
ctcaacgagaagatcaaaatcgaccagttgaagaaatcgttgcacgctgtcttttcacaa
tttgggaagatattggatgtgttagcatttaaaactctgaaacataaaggtcaagcttgg
gttattttcgaggatgttaactccgctaccaatgctcttaggcgaatgcagggctttcct
ttttacgacaaggaaatgagaatacaatatgcaaagactaaatctgacataatagcaaaa
gcagatggcacttttgtcccccgagagaagcgaaagaggcatgacgaaaagggagggaaa
aaacggaaagaacaacttgatcctaatcaagctgcagcaggtttgaatccatcttatgcg
ggtgcttacggtgcaacacctcctctatcacaaataccctacctgggtgctagacctata
gtcccagaagcacctgcaccaccaaataacattctatttgttcagaatcttcctcatgat
gcaactgcgatgatgctgcaaatgctcttcaaccaataccctggtttgaaggacgttcga
atggtggaagcaaaaccaggtattgcctttgtggagtatgaaaacgagatgcaatcaaca
gttgcaatgcaggcactacaaggtttcaagatacagcaaaaccagatgctgattacttat
gcaaagaagtag
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