Gossypium hirsutum (upland cotton): 107913887
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Entry
107913887 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein RadA-like
KO
K04485
DNA repair protein RadA/Sms
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107913887
DNA repair and recombination proteins [BR:
ghi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
107913887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
DnaB_C
Zn_ribbon_LapB
NACHT
Lon_C
AAA_22
AAA_16
nSTAND3
Spore_III_AA
AAA_19
SLFN-g3_helicase
AAA
DEAD
ABC_tran
AAA_5
NB-ARC
NTPase_1
AAA_29
DAP3
Motif
Other DBs
NCBI-GeneID:
107913887
NCBI-ProteinID:
XP_040958914
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Position
D10:6830195..6838352
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AA seq
627 aa
AA seq
DB search
MQIIEMKVLRSIYYTHTHFLHRNLSRTPISLSLFSRHFHSSNPRFSLNSLETDGTQRTPH
AWTAYEGLTPDLSTPTSRHKGITQGNESASGDKTDADFETHRTYGKEKNANLSDGDKTQI
AENARYIPKENTDGMSRKKAFSVNGFGLGDIVGNKKKGKSRVTWVCENCGYSDGQWWGVC
RSCDFSGTMKRFSEVETKNRGLEFSXDAGDVEPVKLIDVNSGVKKTDYRIPMFGPFGSEV
ARVLGGGVVPGSLVLIGGDPGVGKSTLLLQMAALIAEGHDSYQPTCVVYVSGEESVEQIS
SRAERMKIGANELYLYAGTEIKDILTKIQSLSPRALIVDSIQTVYLKEVTGSAGGLPQVR
ECTSALLWFAKKTNIPVLLAGHVTKSGDIAGPRVLEHIVDAVLYLEGEKCSSHRLLRSVK
NRFGSVDELGIFEMSQLGLQVVLNPSEMFLSDQNSDSEFLAGLAVAVIMDGSRAFLIEIQ
ALCVSSSTVSRHVNGIQASRADMLISVLAKQAGLKIQENAVFLNVVSGVSLTETAGDLAI
AASICSSFLEFPIPSGVAFIGEIGLGGELRMVSRMDKRVNTVAKLGYKKCIVPMSAKKSL
ATLDLGELEIIGCNDLKGVINTVFTKN
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcatagaaatgaaagtgttgagatcaatttactacacccatactcacttcctt
catcgcaatctctccagaacccctatttccctctccttattttcccgccatttccattcc
tccaatccccgcttctctctaaattccctggaaaccgatgggacccaaagaacaccgcat
gcctggaccgcctacgagggactcacccccgacctttctacgcctaccagcagacacaaa
ggcattacccagggtaacgagtcggcttcaggagacaaaacagatgcggattttgagacc
cataggacttatgggaaggaaaaaaatgctaatttgagcgatggagacaaaacccagatc
gccgaaaatgctcgttatatccccaaggaaaacactgatgggatgagtcgaaagaaggcg
ttctcggttaatgggttcggattgggggacatagttgggaataagaagaaagggaaaagt
agagttacgtgggtttgtgagaattgtgggtactcagatggacagtggtggggagtttgc
cgttcttgcgatttttccgggacgatgaagaggttttcggaagtggagactaagaacaga
gggttggaattttcgngggatgcaggggatgtggaacctgtaaaattgattgatgttaac
agtggggttaagaagacggattaccggattccaatgtttggaccctttggaagtgaagtt
gctagagtgcttggaggtggcgttgttcctggttcgttggttttgattggtggtgatcct
ggtgttggaaagagcacccttctgttgcagatggctgcgctaattgctgaagggcatgac
tcttatcaacctacttgtgttgtatatgtatctggtgaagagagtgttgaacaaattagc
agcagagctgaacgtatgaagattggagcaaatgaactttacctttatgctggtactgag
attaaggacatattgacgaaaattcagtccctctcaccacgggctctaattgttgattca
attcagacggtatacttaaaggaagtcaccggaagtgctggaggtctccctcaggtcagg
gaatgtacatcagctttattgtggtttgcaaagaaaaccaacatcccagttcttttggct
ggacatgtaacaaaatctggtgatatagcaggacctcgtgtcttggagcacattgtagat
gctgtcttatatctggaaggggaaaagtgctcatcacatcgtttgcttagatctgtgaag
aatcgttttgggtcagttgatgagctaggaatatttgaaatgtcacaactgggactgcaa
gttgttttaaaccccagtgagatgtttttaagtgaccagaactctgattcggagttttta
gctggacttgctgttgctgtaattatggatggatctcgggctttccttattgaaattcag
gccttgtgtgtatctagctcaacggtttctagacatgtgaatggaatccaagcaagtaga
gccgacatgcttatctctgtccttgccaagcaagctggtctaaagatccaagagaatgct
gtttttctaaatgttgtcagtggagtatcattgacagagactgctggggatcttgcaata
gcagcttcaatttgtagcagcttcttagagtttcctattcccagtggagttgcattcatt
ggtgaaattggccttggtggtgagcttcgcatggtatcaaggatggacaaaagagtaaac
acagtggcaaaactaggatataagaagtgtatagtgcccatgtcagctaaaaaatcatta
gcaactctggatttgggggagctggagattattggctgcaatgatttgaagggggtcatc
aatacagtgtttactaaaaattga
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