Gossypium hirsutum (upland cotton): 107913892
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Entry
107913892 CDS
T04793
Name
(RefSeq) nuclear pore complex protein NUP35
KO
K14313
nuclear pore complex protein Nup53
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107913892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107913892
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107913892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
KCNQ2_u3
Motif
Other DBs
NCBI-GeneID:
107913892
NCBI-ProteinID:
XP_016698048
UniProt:
A0A1U8KAQ9
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All DBs
Position
D10:7308877..7311953
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AA seq
311 aa
AA seq
DB search
MSTVVHRTPKSGRQSLFFQDLASPISARKGNFSSPGQAAAVSALWRDNFRGSDLPPPPMY
TLEDRVDFSPESGALDYPISSEIKSDPRTPVRSSGRDFSTPATNKSRASTSFAVPKASSS
EQDDKGKGSPVEGMAQPGALITLPPPRAVARPEIQRNSVPTANLDEEEWVTVYGFSPADT
NLVLREFEKCGVILKHVPGPRDANWIHILYSKRSEAQRALGRNGMQINGVLMVGVKPVDQ
MQREALNERLNHQGFMTLTPASSRTSECNNFRPPRPYYLQNGNANARQSEGVMASPTKSL
GNKVMEYLFGS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgtggttcatagaactccaaaatcaggaaggcagtcattgtttttccaagac
ttggcatcaccaatctctgcccggaaagggaatttctctagtccaggtcaagcagcagcc
gtctcggctttatggcgagacaatttcagaggctcagatcttccgcctcctcctatgtac
accttggaggaccgtgtggatttttcacctgaatctggagcattggattatcctatatct
tctgaaatcaagtcagatccaagaactccagtccgaagttctggacgtgacttctctact
ccagcaacgaacaagtcaagggctagcacttcatttgcagtacccaaggcaagtagtagt
gagcaagatgacaagggaaagggctctcccgttgagggcatggctcagcctggtgcattg
atcacacttccacctccgagggcagttgctaggccagagatacagaggaactccgtacct
acagcaaatctagatgaggaagaatgggttactgtttatggattttctcctgctgataca
aatttagttttgcgagagtttgaaaagtgtggtgtgatattgaaacatgttcctgggcca
agagatgctaactggatccacattctttattcgaaacgatccgaggctcaacgggctctt
ggcaggaatggaatgcaaattaatggagtactaatggttggtgtgaagccagtggatcaa
atgcaacgcgaggcattaaatgaaagattgaatcatcagggcttcatgactttgactccg
gcatcaagtagaacatcagagtgtaacaatttcaggccacctcgaccgtactatcttcaa
aacggcaatgccaatgcacgacagtcggaaggtgttatggcaagccctacaaaatcacta
gggaacaaagtcatggagtacttgtttggatcttag
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