Gossypium hirsutum (upland cotton): 107913907
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Entry
107913907 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107913907 isoform X1
KO
K17925
sorting nexin-13
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
107913907
Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
107913907
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
107913907
NCBI-ProteinID:
XP_016698064
UniProt:
A0A1U8KBN0
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Position
D10:7624782..7631911
Genome browser
AA seq
1139 aa
AA seq
DB search
MNRQKPKPVTVGDLVEEAKKRIVILAICVVGLSYLMSVTSSSVLVNLPAAASLIILLRYF
SLEYEMRRKADAYNIKSEATDASTSKQPPEGPKVVGHCDWRRKVNSPVVENAIDQFTRHL
ISEWVTDLWYSRLTPDKEGPEELVQIINGVFGELSDRMRNINLVDLLTRDLINLFCSHLE
LFRISKAKFENRQSVPLTIEYRDAEIRRVLAAENKLHPALFSTEAEHKVLQHLTNGLISL
TFRPEDLQCTFFRYVVRELLACAVIRPVINLVNPRFINERIESAVISMTKAKRGLNAAQD
ASQHKPNSSSKIPSDHFSKFLDPSVTGVELVQLKTNQSGAAGGTTAADNLNGTQLSKDPL
LSMDTRTSRSWNSVSLNSQTGAERGIERHRSGGEWGDMLDLMSRRKTEALAPENFENMWT
KGRNYKKKEGEKRLTEQVPQHSSAGNPATVDHSKVVSKTRDKYPTKLNSSESHGAQHALT
DQWKIEKSFPHEVRNVPHCSSVLSYQEDDDHDLVDLEEVESESNDSFTSGEEETGNVLGL
DATGTKVWDSKSNRNLTFSHIHHPLENPEGHMVKKAGGRRVHYRRLTRATSSRKRSRLTG
QKLPVWQEVERTSFLSGDGQDILNSLNGHGKAEYSSDDSEAEFFGRLHSGASASSSASSV
AVSETYNLTANSLQSSLAVGSFFKLRCEVLGANIVKSGSKTFAVYSISVTDVNNKHSWSI
KRRFRHFEELHQRLKQFPEYKLHLPPKHFLSTGLDIPVIRERCKLLDEYLKKLLQLPTIS
GSIEVWDFLSVDSQTYVFSNSFSIIETLSVDLDDNPSEKGRKASNVMGPLMGPLSSRRQL
LDTESKGPSSQIRPNHATDGSRKAKNVPYSPSKNPTEEWCKSVEDTGSGDARVRNTSSIK
NTGKNVKGRENERVEDASELLLDAATYPTLPVEWVPPNLTAPLLDLVDDIFQLQDGGWIR
RKAFWVAKQILQLGMGDAFDDWLIEKIQMLRKGSVVASGIKQIEQILWPDGIFITKHPRR
QRPPPSSSPSQASPRSQSPELSSPRLTAEQQQLEAERRAKFVYELMIDKAPAAIVGLVGH
KEYEQCAKDLYFFIQSSVCLKLLAYDLIELLMLSAFPEMEYVFKQLHEEKHKFGEYKAN
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggcaaaagccgaagccggtgacggttggtgacttggtggaggaagccaagaag
cgaattgtgattttagctatatgcgtcgtcggattgtcctatcttatgtcagtgacaagc
tcctcggttttggttaatttgcctgctgctgcctccttaatcattctcctccggtatttc
tcgctcgaatatgaaatgcggaggaaagctgatgcatacaacatcaaatctgaagctaca
gatgcctcaacttcaaagcaaccaccagaaggtcctaaagttgttggacattgtgattgg
agacgtaaagtaaattctcctgtagttgaaaatgcaatagatcaattcacaagacatctt
atttctgagtgggtgacagatctatggtattctcgtttaacacctgataaggaaggtcca
gaagaattggtgcagatcataaatggcgtttttggggagctatcagaccgcatgagaaat
ataaatctcgttgatttactcacaagggacctaattaatctcttttgttcacatttggag
ctttttcgtatcagtaaagctaaatttgaaaatcggcaatctgtaccactaactatcgag
tatcgagatgctgaaataagacgtgttctggctgcagagaataaactgcacccagcttta
ttctctactgaagctgagcacaaggtgttgcaacatttgacgaatggtctaatttctctc
acattcaggcccgaagatctgcagtgcactttctttcgttatgttgtcagggagcttctg
gcctgtgcagtaattcgaccagtcataaacttagtgaatccaaggtttataaacgagagg
atcgaatctgctgttatatctatgacaaaggctaaaagaggacttaatgctgcacaagat
gcatctcaacacaaaccaaatagttcctcaaaaatcccatctgatcatttttctaagttt
ctagatccttctgtcactggtgttgaacttgtacagttgaaaactaatcagtccggagct
gctggaggcaccactgcagcagataacctaaatggaacacaactttcaaaggatccattg
ctttccatggatactcgaacttctcgttcatggaactctgtgtccttgaattcacaaact
ggtgctgaaagaggtatcgaacgacatcgttctggtggagaatggggtgacatgttagat
ctcatgtcacgtagaaagactgaggcccttgctcctgaaaattttgagaacatgtggaca
aaagggagaaattacaaaaagaaggaaggtgaaaaacgattaactgaacaagttccacag
cattcctctgctgggaaccctgctacagtggatcattcaaaagtagtatctaagaccaga
gacaagtatccaaccaagcttaactcatctgagagtcatggtgctcaacatgcactaact
gatcagtggaaaatagaaaaatcattcccacatgaagttaggaatgtaccacactgctct
tcagtcctatcttatcaggaagatgatgatcacgaccttgttgatttggaagaggttgaa
tcagaaagcaatgattccttcacttcaggagaagaagaaacaggaaatgtactgggtctt
gatgctactggaactaaagtttgggatagtaagagtaacagaaatctgaccttttctcac
attcatcatccacttgaaaatcctgaaggccatatggtaaagaaggctggtggaaggcgt
gtccactatcgaagattaactagagccacatccagcaggaaaagatctagattgaccggt
cagaagttgcctgtctggcaagaggttgagagaacaagcttcctatcaggagatggacaa
gacatacttaattcactgaatggacatggaaaagctgaatattccagtgacgattctgag
gctgaattctttggtagacttcacagtggagcaagtgcttcttcatctgcttcttctgtc
gctgtttcagaaacttataatttgactgctaattccttgcaaagttcgttggctgtgggt
tctttttttaaattgagatgtgaggttttaggtgcaaacattgtgaagagtggttctaaa
acatttgctgtttactccatatctgttacagatgtaaataacaagcatagttggtctatc
aagagaaggtttcgacattttgaggagctgcatcagcgccttaaacaatttccagagtat
aaacttcacttgccgccaaaacattttctctcaacaggtttagacattcctgtaatacga
gaacggtgtaaattgcttgatgaatatttaaagaagctcctgcagcttcctactatttca
ggatcaattgaagtttgggacttcttaagtgttgattcccagacatatgtattctcgaat
tctttttctatcatcgaaactttgtcagttgaccttgacgataatccatctgaaaaggga
agaaaggcttcaaatgttatggggcctctgatgggtcccttatcttccaggagacaacta
ttagacaccgaaagcaagggaccttcatcgcaaatcaggcctaatcatgcaacagatgga
tcaagaaaagcaaaaaatgtgccttattctccatcaaaaaatcccactgaggaatggtgc
aagtctgttgaagatacaggcagtggtgatgctagagtgcgaaatacttcgtctataaaa
aacacagggaagaatgttaaaggaagagagaatgaaagagtggaagatgcttctgagttg
cttcttgatgctgctacatatccgacccttcctgtagagtgggtgccaccaaatttaaca
gctcccttgttggatttggtggatgacattttccagctccaggatggtggatggataagg
cggaaggctttttgggtggccaaacaaattctacaacttggaatgggtgatgcttttgat
gactggctgatagaaaagatccagatgctgcgcaaggggtcagttgttgcgtcagggatc
aagcagattgagcagatactttggcctgatggaatattcataaccaaacatccaaggcga
caacgtccaccaccatccagtagcccatcccaagcttcacctcgttcacaatctcctgaa
ttatcttcacctagattgactgctgagcagcaacaactggaagcagaacgtcgtgcaaaa
ttcgtttatgagctaatgattgataaagcacctgctgctattgtgggtcttgttggtcac
aaggaatatgaacagtgcgccaaggatctctatttctttattcagtctagtgtctgtttg
aagctgctggcatatgaccttattgagctattgatgttgtcggcatttccagagatggaa
tatgttttcaagcagttgcatgaggaaaaacataagtttggtgaatataaagcgaactaa
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