Gossypium hirsutum (upland cotton): 107913998 Help Entry 107913998         CDS       T04793                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism ghi  Gossypium hirsutum (upland cotton) Pathway ghi03040   Spliceosome Brite KEGG Orthology (KO) [BR:ghi00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     107913998  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ghi03019]     107913998    03041 Spliceosome [BR:ghi03041]     107913998 Messenger RNA biogenesis [BR:ghi03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      107913998 Spliceosome [BR:ghi03041]  Complex B   Other components    Prp19-related factors     107913998  Complex C     107913998 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf ARM_TT21_C Motif Other DBs NCBI-GeneID:  107913998 NCBI-ProteinID:  XP_016698184 UniProt:  A0A1U8KC12 LinkDB All DBs Position A05:complement(16385414..16390152) Genome browser AA seq 913 aa AA seqDB search MSLPKELYPSQDDLLYEEELLRNPFSLKLWWRYLIARSDAPFKKRFIIYERALKALPGSY KLWHAYLRERLEIVRNLPVTHPQYETLNNTFERALVTMHKMPRIWIMYLSTLTEQKLITK TRRAFDRALCALPVTQHDRIWEPYLVFVSQRGIPIETSLRVYRRYLKYDPSHIEDFIEFL VNSNLWQEAAERLASVLNDGQFYSIKGKTKHRLWLELCDLLTTHATEVSGLNVDAIIRGG IRKFTDEVGRLWTSLADYYIRRNLFEKARDIFEEGMTTVVTVRDFSVIFDAYSQFEESMV ALKMENMDLSDEEEEEEEEDEEDIRLDIALCKSKSKFEKKIFKGFWLHDDKDVDLRLARL EHLMNRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTIDPMKAVGKP HILWVAFAKLYETYKDLANARVIFDKAVQVNYKTVDHLASIWAEWAEMELRHKNFKGALE LMRRATAEPSVEVKRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGTLESTRVVYERIL DLRIATPQIIINYAFLLEENKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKS KLERARELFEHAVETAPADLVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVSNHEKLGM YEIYIARAAEIFGVPKTREIYEQAIQSGLPDKDVKTMCLKYAELEKSLGEIDRARAIYVF ASQFADPRSDADFWDKWREFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLMQKDQ NIDEAKDKMKQAGISEDEMAALERQILPAADNAIAKDNSRKVGFVSAGVESQADGGLKTT ANLEDIDLPDESDSDEEKVEIAQKDVPSAVFGGIRKREDGDDIQDGDDASAAKEKGGKSL LGALERIKRQKQA NT seq 2742 nt NT seq  +upstreamnt  +downstreamnt atgtcgctgccaaaggaactatacccatctcaagatgaccttctttacgaagaagaactg ttaagaaacccctttagtttgaaactctggtggaggtatttaatagctagatcagatgcc cctttcaagaaaagatttataatctacgagcgagccttgaaagctttgcctggtagttac aagctttggcatgcttatttacgtgaacgtctcgagattgttcgcaatttacctgttact caccctcaatatgaaacccttaacaatacttttgagagggcgcttgttacaatgcataag atgcctaggatttggataatgtacttgtcgacgttaactgaacagaaattgattactaag acacgtagggcgttcgatagagcactgtgtgcgttgcctgtgactcaacatgataggatt tgggaaccttatttggtttttgtgagtcaaaggggtatccccattgagacatcgcttagg gtttataggagatatttgaagtatgatcctagtcatattgaggatttcattgagtttttg gtgaattcaaatctgtggcaagaagcagcagagaggttagcgtctgttttgaatgacggt cagttttattcgataaagggtaaaactaagcataggttgtggttagagttgtgtgatttg ctcacaacacatgcgacagaggtttcagggcttaatgtggatgcgataatcagaggtgga attagaaaattcacggatgaagttgggagactttggacttcacttgctgattattatatc agaagaaatctgttcgagaaggcgagggatatttttgaggagggaatgacaactgtggtt actgtgagggatttcagtgtcatatttgacgcttattcacaatttgaagagagtatggtt gcccttaaaatggagaacatggatttgagtgatgaggaagaagaagaggaagaggaggac gaagaagacatccgtttggacattgctctgtgcaaatcaaaatccaagtttgagaagaag atatttaaggggttttggttgcatgatgataaggatgttgatttgaggttggctcggtta gagcatttaatgaatagaaggccggaattggctaacagtgtccttttacggcagaatcca cataatgtggagcaatggcaccgtagggtcaagttatttgagggaaatcccaccaagcaa atattgacatacacagaggcagttaggacgattgacccaatgaaagctgttggaaagccc catattctatgggtggcttttgcaaagctttatgagacatataaagatctggcgaatgct cgtgtcatttttgataaagctgtccaagtaaattacaagactgttgatcacctggcaagt atatgggctgagtgggcagagatggagctgaggcacaagaatttcaaaggtgcattggag ctgatgagacgtgctacagctgagccttctgttgaagtcaaacgaagagtggctgctgat gggaatgaacctgttcagatgaagctacataaatccttgaggctctggacattctatgtg gacttggaagagagtctgggtacactggagtcaactcgagtggtctatgagagaatactt gatttaagaattgctacgccacaaattataataaactatgcatttttattagaggagaac aaatattttgaagatgctttcaaagtgtacgaaagaggggtcaagatattcaagtatcca catgtgaaggatatatgggtcacttatctgtcgaagtttgtaaagagatatgggaaatca aaactggaacgagcaagggagctgtttgagcatgctgttgaaacagcacctgctgattta gtaaaacccctgtatcttcaatatgcaaagctggaggaggattacgggctagcaaaacga gctatgaaggtctacgatcaagcgactaaggctgtttcaaatcatgagaagcttggcatg tatgagatttacattgcccgtgcagctgagatctttggtgttccaaaaacaagagaaatt tatgagcaggcaatacagtctggccttccagataaagatgtgaagacaatgtgtttaaaa tatgcagagttagaaaaaagcttaggagaaattgatcgtgctcgagcaatatatgtattt gcatctcagtttgctgatccacgctctgatgcagatttttgggataaatggagggagttt gaggtgcaacatggtaatgaagataccttcagagaaatgttgcgtattaaacggagtgtc tctgcaagttatagccagacacacttcattctccctgagtatctgatgcagaaggatcag aacatcgatgaagctaaggacaaaatgaaacaggctggtatctctgaggatgaaatggct gctcttgaaaggcagatactacctgcggctgataatgctattgccaaagacaactctagg aaagtagggtttgtgagtgctggagttgagtcacaagccgatggtgggttgaaaacaaca gcaaatctcgaagacattgatttgccagatgaaagtgattcggatgaagaaaaagttgaa attgcacaaaaggatgtcccgtctgccgtgtttggaggtattcggaagagggaagatggc gatgacattcaggatggagatgatgcctcggctgccaaagaaaaaggcggtaagagccta ctgggtgcacttgagcgaattaaaaggcagaaacaagcctag

DBGET integrated database retrieval system