KEGG   Gossypium hirsutum (upland cotton): 107914000
Entry
107914000         CDS       T04793                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 1
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107914000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107914000
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    107914000
Membrane trafficking [BR:ghi04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    107914000
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107914000
  Exosomal proteins of other body fluids (saliva and urine)
   107914000
  Exosomal proteins of colorectal cancer cells
   107914000
  Exosomal proteins of bladder cancer cells
   107914000
SSDB
Motif
Pfam: VPS28
Other DBs
NCBI-GeneID: 107914000
NCBI-ProteinID: XP_016698187
UniProt: A0A1U8K6S5
LinkDB
Position
A05:16396404..16398134
AA seq 156 aa
MDVKLWHDKWEGEMYKTVVELYAIIKTTEKLGKKAYVRDIIFSSSEYETECQKLISHVPS
IKCSAVTYKINRLETYGVPAIAASATSSAAVVAECVLNFVTAIIDSLKLNMAAVDQVYPL
LPDLAASLDKLGILPPDFKGKMKEWVSRLSNMEAAP
NT seq 471 nt   +upstreamnt  +downstreamnt
atggacgttaagctgtggcacgacaagtgggagggagaaatgtataaaactgtcgtggag
ttgtatgccattatcaaaacaactgagaagcttgggaagaaggcttatgtgagggatatt
attttctcatcatctgaatatgaaactgagtgccaaaagcttatttcccatgtccctagc
attaaatgttctgcagttacatataaaataaatcgtctggagacctatggggtgcctgcc
attgctgcatctgctacttcctctgctgccgttgtggccgaatgcgtgctgaatttcgtt
actgccatcatcgattctctgaaactcaatatggcggcagttgatcaagtgtatcctctg
ttgcctgatctcgcagcatcacttgataagcttggtattttgccacctgatttcaaaggg
aagatgaaggaatgggtttcaaggttgtcgaacatggaggccgctccatga

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