Gossypium hirsutum (upland cotton): 107914050
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Entry
107914050 CDS
T04793
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107914050
Membrane trafficking [BR:
ghi04131
]
Protein recycling
Others
EARP complex
107914050
Endosome - Golgi transport
Tethering complex
GARP complex
107914050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
107914050
NCBI-ProteinID:
XP_016698259
UniProt:
A0A1U8KC87
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All DBs
Position
D05:complement(24202413..24217024)
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AA seq
703 aa
AA seq
DB search
MAEVAANNANHPCETPKNVFDFGAFVGDLIVDEDASSDDISLEGLQEELEECKNDDVVAN
ILSKGIKLREYTKGVEHNLRKVELDSIQDYIKESDNLVSLHDQIRDCDSILSQMETLLSG
FQVEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIVPPRMVDIIVDGEVND
EYMRTLDILSKKLKFVDTDPMVKDSKALKDVQPELEKLRQKAVSKVFDFIVQKLQALRKP
KTNIQILQQNVLLKYKYIISFLKEHSKEVHLEVRAAYIDTMNKVLSAHFRAYIQALEKLQ
LDIATSNDLIGVETRSTSLFSRGREPLKNRSAVFALGERLNVLKEIDQPALIPHIAEASS
LKYPYEVLFRSLHKLLMDTATSEYLFCDEFFGEESIFYEIFAGPFAVIDEHFNSILPNCY
DAIGLMLMIRIVHQHQLIMSRRRIPCLDSYLDKVNISLWPRFKMVFDMHLSSLRNANVKL
LWEDDSHPHYVMRRYAEFTASLIHINVEYGDGQLELNMERLRMAVDELLMKLAKMFSKPK
LQIVFLINNCDMTIAVLKEAGPEGGKIQQHFEEMLKSNTGLFVEELLMEHFSDLIKFVKT
RASEDPNGSNERPISVSEVEPIVKDFGSRWKGAIELMHKDVITSFSNFLCGMEILRAALT
QLLLYYTRLSDCIKRINGGAALNKDLVSISSIMYEIRKYSRTF
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggttgcagcaaataatgcgaatcacccatgtgaaacccccaaaaatgtgttt
gattttggggcatttgttggagacttgattgttgacgaagatgccagcagtgatgatata
tcgctggaggggcttcaggaagagttggaagaatgcaaaaatgatgatgtggttgcgaac
atattgtctaaaggtataaagctaagggagtacacaaagggggttgagcacaacctgcgc
aaagttgagttggattcaattcaggattatataaaagaaagtgataatctagtgtccctc
catgatcaaattcgtgattgtgatagcatcttgtcacaaatggagacccttctcagtgga
tttcaggttgagattggttccatcagttcagacataaaaattctccaagagaagtctatg
gatatgggtctaaagctaaagaatcgcaaggtggcagaatcaaagctggctaaatttgtt
gaagacattatagtccctccaaggatggttgacataattgttgatggagaggtaaatgat
gaatatatgagaactctcgacattctaagcaagaagctaaagtttgttgatacagatccc
atggttaaagattcaaaagcactgaaagatgttcagcctgagcttgaaaaattaaggcag
aaagcagtatccaaggtgtttgattttattgttcaaaagcttcaagcactgaggaaacca
aagacaaacattcagattcttcaacaaaatgttcttttaaaatacaagtatatcatttcc
ttcctcaaagaacatagcaaggaggtgcaccttgaagttcgtgcagcgtacattgataca
atgaataaggttctaagtgctcatttccgagcttatattcaagcattggagaaattacag
ttggatattgcaacatctaatgatttgattggtgtggagaccagaagcactagtcttttc
tcaagaggaagagaaccacttaaaaatcgttctgctgtttttgcattgggggaaagatta
aatgttctaaaggaaattgatcaacctgcacttattccacatattgcagaggcaagctct
ttaaagtatccttatgaggtcctcttccggagcttgcacaagctgcttatggacacagca
acttctgagtaccttttttgtgatgagttctttggggaggagtccattttttatgaaatt
tttgctggtccttttgctgtcattgatgaacacttcaattctatccttccaaattgttat
gatgctattggcctaatgcttatgatacgcatagtacaccagcaccagcttattatgtct
cggcgaaggattccatgcttggattcatatctagacaaggttaacatttctctctggcct
cgttttaagatggtatttgacatgcacctcagcagtctgcgaaatgcaaatgtgaagttg
ttatgggaagatgatagtcatcctcattatgtcatgaggcgttatgctgaatttacagct
tctcttattcatatcaatgttgaatatggagatgggcagcttgaattaaatatggaacgg
ttgagaatggctgttgacgagctccttatgaagcttgcaaaaatgttttcaaaaccaaaa
ttacaaatcgtgttcctaataaacaactgtgacatgacaattgcagttctgaaggaagct
ggtcctgaaggtgggaaaatccaacagcactttgaggagatgctaaagagtaacacagga
ttatttgtagaggaacttctgatggagcattttagcgatttgataaagtttgtgaaaact
cgagcctcggaggatcctaatggtagcaacgaaaggcctataagtgtgagtgaagtggag
ccgatagtgaaggattttggcagcagatggaagggtgcaatagaattgatgcacaaagat
gtgatcacgtctttcagtaacttcttgtgtgggatggaaatcttaagagctgcattgact
caactgctgctttactatacacgactttcggattgcataaagagaatcaatggcggggct
gccctcaacaaagatcttgtctccatctcatctatcatgtatgaaatcagaaaatactcc
aggactttctag
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