KEGG   Gossypium hirsutum (upland cotton): 107914131
Entry
107914131         CDS       T04793                                 
Name
(RefSeq) F-box protein SKP2A
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107914131
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107914131
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     107914131
SSDB
Motif
Pfam: DUF7885 LRR_6 LRR_4 LRR_At5g56370 LRR_Zer-1 F-box-like LRR_At1g61320_AtMIF1 RsmF_methylt_CI ATRX_C Glyco_hydro_106
Other DBs
NCBI-GeneID: 107914131
NCBI-ProteinID: XP_016698400
UniProt: A0A1U8K7C2
LinkDB
Position
D05:22722460..22727065
AA seq 352 aa
MVAAGNSGVGVRMEGAVITEWKDIPMELLLRIVPLVDDRTAIVASGVCCGWRDAICFGLT
QLSLSWCRKNMNNLVLSLAPKFTRLQTLILRQEYPQLEDNAVEAIANFCHDIQELDLSKS
FKLSDHSLYALARGCPNITKLNISGCTSFSDGALEYLTNFCQKLKILNLCGCVKAATDRA
LQAIGRNCKMLQSLNLGWCDNVGDIGVMSLAYGCPDLKCLDLCGCVRITDDSVIALADKC
LHLRSLDLYYCRNITDRAMYSLAHSRVNNKPSLWQSMKGRYDEEGLRSLNISQCTALTPS
AVQTLCDTFPALHTCSGRHTLVMSGCLSLTSVHCACAVQAHRTLNTIPHTAH
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggttgctgctggaaatagtggcgtgggagttaggatggagggagcggtgatcactgag
tggaaagatattcctatggagctgctgttgagaattgtgcctcttgtcgatgatcggact
gctattgttgcttccggtgtttgttgtgggtggagggatgctatttgcttcggcctcaca
caactcagtctctcatggtgcagaaagaatatgaacaacttggttctctctcttgctcct
aaattcaccagattgcaaactctaatactgcgtcaagagtatccgcagctcgaggacaat
gctgttgaggctattgcaaacttttgtcatgatatacaggagctggacctaagcaaaagt
ttcaagcttagtgatcactctttgtatgcattggcccgtggttgtcctaacattacgaag
cttaatatcagtggctgcacatctttcagtgatggagctcttgaatatttgactaacttt
tgtcaaaaactaaaaatattaaatctctgtggatgtgttaaagctgcaactgaccgtgca
ttgcaggctattggacgaaactgcaaaatgttgcaatctttaaatctgggatggtgtgat
aatgttggtgatataggagtgatgagtctagcttatggatgccctgatctcaaatgcctg
gacttgtgcggctgtgttcgcataacagatgatagtgtgattgcgttggcagataagtgc
ctccatttaaggtcacttgatctgtactactgtcgcaatatcacagacagggcgatgtac
tcgctggctcacagccgagtgaataacaagccttcgttgtggcagtccatgaagggtaga
tatgatgaggaaggtcttagaagtctgaatataagccagtgtactgcactgactccttca
gccgtacagacattatgcgatacgtttccagcccttcacacttgctccggaaggcatacc
cttgtcatgagtggctgcttgagcttaacatcagtgcattgtgcttgtgcggtccaagct
catcggacactcaacactattccccatactgctcattga

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