Gossypium hirsutum (upland cotton): 107914183
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Entry
107914183 CDS
T04793
Name
(RefSeq) nuclear pore complex protein NUP96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107914183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107914183
03036 Chromosome and associated proteins [BR:
ghi03036
]
107914183
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107914183
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107914183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
107914183
NCBI-ProteinID:
XP_016698472
UniProt:
A0A1U8K7J8
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All DBs
Position
D10:10014262..10021533
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AA seq
1062 aa
AA seq
DB search
MASVAGTVCEIHSTASEISRRGTDVNTENSDLHVTLYKKRKISAISDFLPHVMTRIEESL
PSLHSPDYYMEPCLEDMVRMERLEPGYCSCVPDFVVGRSGYGCVKFFGKTDVRGLDLDQI
VKFHRHQVIVYEDESNKPMVGQGLNKTAEVTLKLQIENLGLEKQEVDSIVKKLRQSMRSQ
GAHFIAFDPSNGEWKFLVDHFSRFGLSEDDEEDIIMDDATGAIQDPGVMNGGGNPEIDED
MQLDTNGPLLSHSLPAHLGLDPVKMRELRMLMFPVEEEEDIEDFRGTGSNQKQAFAKEYI
KSSLHNSSQRMPNRTSPHVVRKTPVALLEYNSGTFDSSSSGTVLMTQENKGLPLKTTKRE
GFKLDIKQETPVTGSHSHNIVDAALFMGRSFRVGWGPSGILVHSGAPVGSNDGQRVLSSV
INVEKVAIDKVVRDENSKVKKELVDFAFDAPLNLHKALNYEEKEVDVGSFQLKLLKVVSN
RLELSGICRSYIDIIERQLEVPGLSSSARLVLMHQVMVWELIKVLFSERENTGQLKSMAA
DNEEDMMQDIKEGPPEVDLEALPLIRRAEFSCWLQESVCHRVQEEVSSVNDSGYLEHLFF
LLTGRQLDAAVELAASKGDVRLACLLSQAGGSTVNRSDVSRQLDIWRINGLDFNFIEKDR
IRLYELLAGNIHGALHGIKIDWKRFLGLLMWYHLPSDTALPVVFRTYQHLLDDGKAPFPV
PIYIDEGPVEENANLSRVERFDLSYYLMLLHASEESQLCSLKAMFSTFSSTHDPLDYHMI
WHQRAILEAVGAFHSNDLQALDMGLVSQLLCQEQCHWAIYVALQMPYRDDYPYLQATLIR
EILFQYCESWSSQESQRRFIEDLGIPLQWLHEAMAVYYNYHGDLPRALEHFLECENWQKA
HSIFMTSVAHALFLSAKDSEVWRIATSMENHKSEIENWDLGAGIYISFYVLRSSFQEDNN
TMAELGSLNSKNAACRDFLGCLNESSAVWGGRLHVDARVAYSKMADEICNLLLSDTSGSR
THDEQLSCYDTVFSAPIPEDLHSSHLQDAVAVFTFQLSEVLS
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagttgcagggactgtgtgtgaaattcatagtacagcaagtgaaatttctaga
agggggacagacgtcaatacagaaaattctgatttacatgttacactatacaagaagaga
aagatatctgcaatttctgattttttgccacatgttatgacaaggatagaggaatcttta
cccagtttacattcccctgattattatatggagccttgcttggaagatatggtaagaatg
gaacgcttggaacctggttattgcagctgtgttccggattttgtggttggaagatctggc
tatgggtgtgtaaaattctttgggaaaactgatgttagagggttggatttagatcaaatt
gtgaaattccataggcatcaggtaattgtatatgaagatgaaagcaataagcccatggtt
ggtcaaggccttaacaaaactgccgaggtaactttgaaacttcagattgaaaatttaggc
ttggaaaagcaggaagtagatagtattgttaagaaattaagacagagtatgaggagtcaa
ggggcacacttcattgcatttgacccttctaatggtgaatggaaattcttggttgaccat
tttagcagattcgggttgagtgaagatgacgaggaagatattataatggatgacgcaaca
ggggctatacaagatcctggggtaatgaatggtggtgggaatcctgagattgatgaagac
atgcaactggatactaatggaccactgctttctcattctcttcctgcccatcttgggctg
gaccctgttaagatgagagaattgaggatgttgatgtttcctgttgaggaagaagaggac
attgaggattttagaggaacaggttctaatcagaagcaggcctttgctaaagaatatata
aagtcctctttgcataactctagccagaggatgcccaataggactagcccacatgttgta
cggaaaacccctgttgctttgcttgagtacaactctggtacttttgattcaagctcatct
ggaactgttctgatgacacaagaaaataagggcttgccactgaagacaacaaaaagggaa
ggtttcaagttggacatcaaacaagagacacctgtcactggaagccattctcacaatata
gttgatgcagcattgttcatgggtaggtcatttcgtgtaggttgggggccaagtggcatt
cttgtgcactctggtgcacctgtaggtagtaatgatggccaaagagtattatcttctgta
atcaatgtagaaaaagtggcaattgataaggtagttagagatgaaaatagcaaagtaaag
aaagaacttgttgactttgcttttgatgctccgttgaatcttcataaagctctaaattat
gaagaaaaagaagtggatgttgggtcctttcagctgaagcttctgaaggttgtttctaat
cgcttagagctttctggcatttgtaggagctatatagacattattgagaggcagttggag
gttcctggtttatcttcttctgctcgcttggttttgatgcatcaagtgatggtgtgggaa
ttgattaaagttcttttctcagagagggaaaatactggtcaactgaaatctatggctgct
gataatgaggaagatatgatgcaagatatcaaggaaggtcctccagaagtagacctggaa
gcacttcctcttattaggagagccgagtttagttgttggctgcaagaaagtgtatgtcac
cgtgtacaagaagaagtaagctctgtgaacgattcaggttacttggaacacttattcttt
ctcttgactgggcgacaactagatgcagctgtggagctggcagcttctaaaggagatgtt
agattggcttgtttactaagccaggctggtggatcaacagttaatcgttctgatgtttca
agacagcttgatatttggagaattaatggtctggacttcaatttcatcgagaaggacagg
attcggctttatgagttgcttgctggcaatattcatggtgctttgcatggtattaagatt
gactggaagagattcctaggattgttaatgtggtatcacctaccgtcagatactgctttg
cctgttgtgtttcgaacttatcagcaccttcttgatgatggaaaagctccgtttcctgtt
ccaatttatattgatgaaggaccagttgaagagaatgcaaatttgagcagagtggaaaga
tttgatctttcatactatcttatgcttctgcatgccagtgaagagagtcaactatgttct
ctgaaggcaatgtttagcaccttctcttcaacacatgatccccttgactaccatatgatc
tggcatcagcgggcaatcttggaagctgttggtgctttccattctaatgatcttcaagca
cttgacatgggacttgtatcccagttactatgtcaggagcagtgtcactgggctatctat
gtagcccttcaaatgccctaccgtgatgattatccttaccttcaagctactcttattagg
gaaattctgttccaatattgtgaatcttggagttcacaagaatcacagcgccgatttatt
gaggacttgggtattcctttgcagtggttgcatgaagctatggcagtttattacaattac
catggggatttgccaagggctcttgagcactttctggaatgtgaaaattggcaaaaggct
cattctattttcatgacttcagttgctcatgcattgttcttgtctgccaaggactcagag
gtatggaggattgccacgtccatggagaaccacaagtctgaaattgaaaattgggatttg
ggagctggaatatatatttcattctatgtgctaagaagttcattccaggaggataacaat
actatggctgaacttggttccctcaacagcaaaaatgcagcttgtagagactttcttggc
tgtttgaatgagtcctcagcagtttggggtggcaggttacatgttgatgctagggtggca
tattcaaagatggcggatgagatatgcaatttgttgctgtcagatacaagcggaagtcgg
acgcatgatgagcagttaagctgctatgatacggtgttcagtgctcccattccggaagac
cttcattcgagtcatttacaggatgcagttgcagttttcactttccagctttcagaagtg
ttgagctaa
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integrated database retrieval system
