Gossypium hirsutum (upland cotton): 107914299
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Entry
107914299 CDS
T04793
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00906
Carotenoid biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
107914299
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ghi01006
]
107914299
Enzymes [BR:
ghi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
107914299
Prenyltransferases [BR:
ghi01006
]
Terpene biosynthesis
Squalene/phytoene synthase
107914299
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Motif
Pfam:
SQS_PSY
HTH_25
Motif
Other DBs
NCBI-GeneID:
107914299
NCBI-ProteinID:
XP_040933541
UniProt:
A0A1U8KCJ8
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Position
A09:2255059..2257869
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AA seq
389 aa
AA seq
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MAGVLLWVVCPKGNATALLSLIPRSGKHKRCRVHQKVKFSTGVSAISSAVANPARSSEEK
VYDVVLKQAALVKEQRGKQTLDLGTRTETDGFTDWDLLNEAYDRCGEVCAEYAKTFYLGT
LLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPRALDRWEKRLDDLFEGRPYDMLDAA
LSDTVSKYPVDIQPFKDMIEGMRLDLRKSRYMNFDELYLYCYYVAGTVGLMSVPVMGIAP
ESKASVESVYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELARFGLSDDDIFRGQV
TDKWRNFMKDQIKRARMFFDEAEKGVSELNAASRWPVWASLLLYRQILDAIEENDYNNFS
KRAYVGKVKKFASLPVAYGRALMGTSKLF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgttcttctttgggtggtatgtcccaaagggaatgccactgctttacttagc
ttgataccaaggagtgggaagcataaaaggtgtagggtacatcaaaaggtgaagttttct
actggggtttcagctatttcaagtgcagtggctaacccagcacgatcttcagaagagaag
gtttatgatgtggttttaaagcaagctgctttggttaaagaacaaagggggaaacaaact
ttggatttaggaacaagaactgaaactgatggattcactgattgggatcttttgaatgaa
gcttatgatcggtgtggtgaagtatgtgctgaatatgctaagactttctatttgggtaca
ttacttatgacaccggagcgtcggagagctgtgtgggcgatttacgtttggtgtaggaga
acagatgagcttgtggatggacctaatgcttcacatattacaccaagggcacttgaccga
tgggagaaaagattagacgatcttttcgaaggtcgaccttatgatatgctcgatgccgct
ttatccgatactgtctcgaagtaccctgtagatatacagccattcaaggacatgatagaa
ggaatgagattagatttaaggaagtcgagatatatgaattttgatgagctctacctttac
tgctactacgttgccgggacagttggactaatgagtgttccagtaatggggattgcacct
gaatcgaaagcatcggtggagagtgtctataatgccgcattagcccttggaatcgctaat
caacttactaatatacttagagatgttggtgaagatgctaggagaggaagaatatatcta
ccacaagatgaactggcacggtttggactgtcggatgatgacatatttcgtggacaagta
acggataagtggaggaacttcatgaaagatcagataaaacgagcgaggatgttcttcgac
gaggcagaaaagggtgtttccgagctaaatgcggcaagcagatggccggtgtgggcatca
ttgttgctgtatcgacagatattagacgccattgaagaaaatgattataacaatttcagc
aaaagagcgtatgtagggaaagtaaagaaatttgcttcacttccagtggcatatggaaga
gcacttatgggcacttccaaattgttctga
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