Gossypium hirsutum (upland cotton): 107914332
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Entry
107914332 CDS
T04793
Name
(RefSeq) serine/arginine-rich splicing factor SR30 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107914332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107914332
Spliceosome [BR:
ghi03041
]
Common components
Common spliceosomal components
SR proteins
107914332
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_9
CblD
RRM_7
Motif
Other DBs
NCBI-GeneID:
107914332
NCBI-ProteinID:
XP_016698703
UniProt:
A0A1U8KDG3
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All DBs
Position
D10:complement(13434648..13437432)
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AA seq
229 aa
AA seq
DB search
MGHSSRTLYVGNLPGDTRMREVEDFFYKYGPIVDIDLKIPPRPHGYAFVEDPRDAEDAIR
GRDGYKFNGNRLRVELAHGGRRPSSSVDRYSSYSGSSSRGPSRRSDYRVLVTGLPSSASW
QNLKDHIRKAGDVCFSQVFRDREGMIGIVDYTNYDDMKYVIRKLDDSEFRNPFSQAYIRV
EYDSRYDSRRSYFRSPSRSPYSRNPNLELNLSILFQQLILPICKHILSL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgggtcattcaagccggacgctctatgtgggcaatttgcctggggatactcgtatgaga
gaagttgaagatttcttttacaagtatggacccattgttgatattgacttgaagatccca
ccaaggccccatggttatgcatttgttgaggatcctcgtgatgctgaagatgcaattcgt
ggtcgagatggttataaatttaatgggaatcgtctaagagttgaacttgctcatggtggg
cgaagaccttcttcatctgtggatcgttatagtagttacagtggtagcagtagtcgtggg
ccttccaggcgctctgattatcgtgttttggtgactggtttaccttcttctgcttcatgg
caaaacctaaaggatcacatacgaaaagctggggatgtttgtttctctcaagtgtttcgt
gatcgtgaaggcatgatagggattgtagattacacaaactatgatgatatgaaatatgtt
ataaggaagcttgatgactctgagtttcgaaatccatttagccaggcttacatacgggtg
gagtatgattcaagatatgattctaggcgcagctactttagaagtcctagtcgtagccca
tatagtcgaaaccctaatctagaattgaatctatcaatcctttttcaacagttaattctg
cccatttgcaaacatattctatcattgtaa
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