Gossypium hirsutum (upland cotton): 107914414
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Entry
107914414 CDS
T04793
Name
(RefSeq) syntaxin-121-like
KO
K08486
syntaxin 1B/2/3
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107914414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107914414
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107914414
Membrane trafficking [BR:
ghi04131
]
SNARE
Syntaxin (Qa)
Stx-PM
107914414
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
107914414
Exosomal proteins of other body fluids (saliva and urine)
107914414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
DUF6175
DUF4410
DUF6161
DUF5790
Synaptobrevin
Carbam_trans_N
T2SSF
ZapD
Motif
Other DBs
NCBI-GeneID:
107914414
NCBI-ProteinID:
XP_016698815
UniProt:
A0A1U8KK65
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Position
A04:18381333..18383280
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AA seq
327 aa
AA seq
DB search
MNNLFSGSFSRFRSEEASPDHHVIEMTQSSSTSGGVNLDKFFEDVESIKDELKELERLNH
DLSSSHERSKTLHNAKAVKELRAKMDADVAMALKKAKLIKVRLEALDRSNASNRSLLGCG
PGSSSDRTRTSVVNGLRKKLKDSMESFNGLREKISSEYRETVQRRYFTVTGENPDEKTLD
LLISTGESESFLQKAIQEQGRGRILDTIYEIQERHDAAKDLEKNLKELHQVFLDMAVLVQ
AQGEQLDDIESHVNRANSFVRGGTERLQTARNYQKNTRKWTCYAIILLLVIVLFVVLFTV
KPWENNGGGGGGGNNNPTPTPPAPPTA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatctgttctcaggctccttctctcgcttccggagcgaagaggcgtcccctgat
caccatgtaatcgagatgactcagtcttcctccacctctggcggtgttaacctcgacaag
ttcttcgaagacgtcgagtccatcaaagacgagctcaaagaactcgagaggctaaaccac
gacctttcatcgtctcacgagcgaagcaagacgttgcacaatgcgaaagccgtgaaagaa
ttgagagcaaagatggatgctgatgtagccatggccttgaaaaaggccaagctcattaag
gttaggttggaagcgcttgaccgctccaacgcctctaaccggagtttacttggctgtgga
ccgggttcttcttcggacaggacgaggacgtcggttgtgaacgggctgagaaagaagttg
aaggattctatggagagttttaatgggttgagggaaaagatctcgtcagagtatagagaa
actgttcaaagaagatatttcacggttacaggagaaaacccagatgagaaaactcttgat
cttttgatttcaacaggagagagtgagagttttttgcaaaaagccattcaagaacaaggg
aggggcagaattttggacaccatctatgagattcaagaaaggcatgatgctgctaaggat
ttggagaagaatctcaaggaattgcatcaagttttcttggacatggcggtgctggttcag
gctcaaggagagcaattggatgatatcgagagccatgtgaatagggctaattcatttgtg
agaggtggaactgagaggcttcaaacagctaggaattaccagaaaaacaccaggaaatgg
acttgttatgctatcatactgttgctggtgatcgtcttatttgtggtgttgttcactgtt
aaaccatgggaaaacaatggcggtggtggcggcggtggtaacaacaatccaacaccaacc
ccgccagctccacctactgcttga
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