Gossypium hirsutum (upland cotton): 107914491
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Entry
107914491 CDS
T04793
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A isoform X1
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04144
Endocytosis
ghi04517
IgSF CAM signaling
ghi05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107914491
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107914491
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107914491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107914491
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
107914491
Membrane trafficking [BR:
ghi04131
]
Others
Actin-binding proteins
Arp2/3 complex
107914491
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
107914491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
Beta-prop_WDR5
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR55
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_Aladin
Tricorn_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
RMC1_N
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Ge1_WD40
WD40_MABP1-WDR62_2nd
BNR_3
eIF2A
Motif
Other DBs
NCBI-GeneID:
107914491
NCBI-ProteinID:
XP_016698907
UniProt:
A0A1U8K8T5
LinkDB
All DBs
Position
D10:complement(18090908..18108556)
Genome browser
AA seq
377 aa
AA seq
DB search
MAAVAVHQFAQCITCHAWSPDHSMVAFCPNNNEVHIYKLVNDKWEKVHVLQKHDQIVSGI
DWSGKSNRIVSVSHDRNSYVWNREGPEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAK
TVCVCYYEQENNWWVSKVIRKKHDSSVTSVAWHPNNILLATTSTDGKCRVFSTFIKGVDT
RESKTGSSSDPKFGEQIVQLDLSSSWAFGVKWSPSGNTLAYVGHNSMIYFVDDIGPSPLA
QNVAFRNLPLRDVLFVSEKMVIGVGFDCNPMVFAADKSGLWSFIRFLGERKESLSGPKSG
SQFSEAFGKLYAQAKHGLSNDTVEPSKIQGAVHDNCINCIALLNKKGSQTKRFSTSGMDG
KVVIWDLGNQQDLKEYL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcgccgttcaccagttcgctcagtgcatcacttgccatgcttggagtccc
gatcactccatggtagcattttgcccaaataataatgaggttcacatttataaattggtg
aatgacaagtgggagaaagttcatgttcttcagaagcatgatcaaattgtttctgggata
gactggagtggaaagtcaaacagaattgtttctgtatctcatgatcggaattcatatgtt
tggaaccgagaaggaccagagtgggtaccaactcttgttattcttaggctcaatcgtgct
gcactttgtgttcggtggagccccaaagaaaacaagtttgctgttggaagtggtgctaaa
actgtgtgcgtatgctattatgagcaagagaataactggtgggtaagcaaagttatcagg
aaaaaacatgattcctctgtcacaagtgttgcttggcatcctaataatattctacttgct
acaacatccacagatggaaaatgccgagtattttctacatttatcaaaggtgttgataca
agggaatcaaaaacaggctcttcttcagatccaaagtttggagagcaaatagttcagctt
gatctgtcatcttcatgggcatttggggtgaagtggtcaccaagtggcaatactttggct
tatgtaggtcataattctatgatttactttgttgatgatattggtccttcccctttggcc
cagaatgttgcattccgtaatttgcctcttcgtgatgtcctatttgtttcagagaaaatg
gtcataggcgtgggatttgactgcaacccgatggtttttgcagcagataaatcaggatta
tggagctttatcagattcttaggtgaaaggaaagaatctttgtcaggtccaaaatctggt
tctcagttttctgaagcatttggcaaattatatgctcaagcaaagcacggattgagcaat
gatacggttgaaccttcaaagatacagggagctgttcatgacaactgcatcaattgtatt
gcacttctaaataaaaaaggttcccagacaaagcgcttcagcacctcaggaatggatggg
aaagtggtaatttgggatttgggaaaccagcaagatcttaaggagtatctctaa
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