KEGG   Gossypium hirsutum (upland cotton): 107914491
Entry
107914491         CDS       T04793                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A isoform X1
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04144  Endocytosis
ghi04517  IgSF CAM signaling
ghi04519  Cadherin signaling
ghi05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    107914491
   04519 Cadherin signaling
    107914491
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107914491
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    107914491
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107914491
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ghi04812]
    107914491
Membrane trafficking [BR:ghi04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    107914491
Cytoskeleton proteins [BR:ghi04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     107914491
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd ANAPC4_WD40 WDR55 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_Aladin Tricorn_2nd Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_HPS5 RMC1_N Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Ge1_WD40 WD40_MABP1-WDR62_2nd BNR_3 eIF2A
Other DBs
NCBI-GeneID: 107914491
NCBI-ProteinID: XP_016698907
UniProt: A0A1U8K8T5
LinkDB
Position
D10:complement(18090908..18108556)
AA seq 377 aa
MAAVAVHQFAQCITCHAWSPDHSMVAFCPNNNEVHIYKLVNDKWEKVHVLQKHDQIVSGI
DWSGKSNRIVSVSHDRNSYVWNREGPEWVPTLVILRLNRAALCVRWSPKENKFAVGSGAK
TVCVCYYEQENNWWVSKVIRKKHDSSVTSVAWHPNNILLATTSTDGKCRVFSTFIKGVDT
RESKTGSSSDPKFGEQIVQLDLSSSWAFGVKWSPSGNTLAYVGHNSMIYFVDDIGPSPLA
QNVAFRNLPLRDVLFVSEKMVIGVGFDCNPMVFAADKSGLWSFIRFLGERKESLSGPKSG
SQFSEAFGKLYAQAKHGLSNDTVEPSKIQGAVHDNCINCIALLNKKGSQTKRFSTSGMDG
KVVIWDLGNQQDLKEYL
NT seq 1134 nt   +upstreamnt  +downstreamnt
atggcggccgtcgccgttcaccagttcgctcagtgcatcacttgccatgcttggagtccc
gatcactccatggtagcattttgcccaaataataatgaggttcacatttataaattggtg
aatgacaagtgggagaaagttcatgttcttcagaagcatgatcaaattgtttctgggata
gactggagtggaaagtcaaacagaattgtttctgtatctcatgatcggaattcatatgtt
tggaaccgagaaggaccagagtgggtaccaactcttgttattcttaggctcaatcgtgct
gcactttgtgttcggtggagccccaaagaaaacaagtttgctgttggaagtggtgctaaa
actgtgtgcgtatgctattatgagcaagagaataactggtgggtaagcaaagttatcagg
aaaaaacatgattcctctgtcacaagtgttgcttggcatcctaataatattctacttgct
acaacatccacagatggaaaatgccgagtattttctacatttatcaaaggtgttgataca
agggaatcaaaaacaggctcttcttcagatccaaagtttggagagcaaatagttcagctt
gatctgtcatcttcatgggcatttggggtgaagtggtcaccaagtggcaatactttggct
tatgtaggtcataattctatgatttactttgttgatgatattggtccttcccctttggcc
cagaatgttgcattccgtaatttgcctcttcgtgatgtcctatttgtttcagagaaaatg
gtcataggcgtgggatttgactgcaacccgatggtttttgcagcagataaatcaggatta
tggagctttatcagattcttaggtgaaaggaaagaatctttgtcaggtccaaaatctggt
tctcagttttctgaagcatttggcaaattatatgctcaagcaaagcacggattgagcaat
gatacggttgaaccttcaaagatacagggagctgttcatgacaactgcatcaattgtatt
gcacttctaaataaaaaaggttcccagacaaagcgcttcagcacctcaggaatggatggg
aaagtggtaatttgggatttgggaaaccagcaagatcttaaggagtatctctaa

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