Gossypium hirsutum (upland cotton): 107914501
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Entry
107914501 CDS
T04793
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107914501
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107914501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
NPIP
Baculo_LEF5_C
Motif
Other DBs
NCBI-GeneID:
107914501
NCBI-ProteinID:
XP_016698923
UniProt:
A0A1U8KD95
LinkDB
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Position
D10:18433483..18439122
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AA seq
364 aa
AA seq
DB search
MERELVDLFEAAKKAADLAAASDAVSEVSRCVDALKQLRAFPVSYDILVSTQVGKRLRPL
TKHPREKIQTVASDLLELWKKVVIEETTKSKKNGTSSAIKSEKLPKPSAVKSEKLSNTEN
VKAEKVSKDNSVKSVKVEKREANGDVAMAKKTDRGEMGKVEKICKDDRQSPNVKKSSQPP
AGPPKLTSMVKCNDPVRDKFREILVEALSKVPNEVDGDMLDQVNACDPIRVAVSVESVMF
EKMGKSNGAQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPEGLITMTPEEMASEQRQREI
NEIKEKALFDCERGVAPKATTDQFKCGRCGQRKTTYYQMQTRSADEPMTTYVTCVNCNNH
WKFC
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggagagggagctggtggatttgttcgaagctgccaagaaagcggctgatttagccgct
gcctccgacgccgtttccgaggtttcccgatgcgtcgatgccttgaagcagctcagggct
ttccctgtctcttacgatattcttgtttctactcaggttgggaaaaggcttcgacctctc
actaagcatcccagggagaagattcaaactgtggcttctgacttgcttgaactgtggaaa
aaggttgttatcgaggagactaccaagagtaagaaaaatggcaccagtagtgccattaag
tcggagaaacttccaaagccaagtgccgtgaagtctgaaaagctctccaatacagaaaat
gtgaaggctgagaaagtatctaaagataattcagtaaaatctgtcaaagttgagaagagg
gaagcaaatggagatgttgcaatggccaagaagacagatcggggagagatgggtaaggtt
gaaaagatttgtaaggatgacagacaatcaccgaatgtaaagaaatcatcgcaaccacct
gctggtccaccaaagctgacatcaatggtcaaatgtaacgatcctgtgcgtgacaaattt
agggagattcttgtagaggccttgtctaaagtcccgaatgaggttgatggggacatgctt
gatcaagtgaatgcttgcgatcccatcagagttgctgtgtctgtagaatctgtgatgttt
gagaagatgggtaaatcaaatggggctcagaaatttaagtacagatctataatgttcaac
attaaggacccaaacaacccagatttaaggaggaaggttcttctcggagaagtgaaacca
gaagggcttattacaatgaccccagaggaaatggcaagtgaacaaaggcaacgtgaaatt
aatgaaattaaagaaaaagctttatttgattgcgagcgaggtgttgcgccaaaggccacg
acagatcaatttaagtgcggtcgttgtggtcaacgcaagaccacttactatcaaatgcag
acaaggagtgcagatgaacctatgacaacctatgttacgtgtgtcaactgcaacaaccat
tggaaattctgttag
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