Gossypium hirsutum (upland cotton): 107914519
Help
Entry
107914519 CDS
T04793
Name
(RefSeq) WD repeat-containing protein PCN
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107914519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107914519
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107914519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WD40_Prp19
WDR55
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
PQQ_2
DUF4221
Motif
Other DBs
NCBI-GeneID:
107914519
NCBI-ProteinID:
XP_016698948
UniProt:
A0A1U8KDC1
LinkDB
All DBs
Position
D10:18739649..18745441
Genome browser
AA seq
833 aa
AA seq
DB search
MLPKAYRTSSIDWKPSPVVALATSPDGSQVAAARDDGSLEIWLVSPGSVGWHHQLTIHGD
STCRVSSLVWCCVGSKGPSPGRLFSSSIDGSVSEWDLFDLKQKILLESIGVSIWQMAVAP
INRLPTHEETRSQNFGNGYLNDKYECDDTDDDENCESEDVSDSEQVYQKLVMEDRCVAIA
CDDGAVRMYTISDLDKLIYQKSLPRVSGRALSVTWSHDSNRIYSGSSDGLIRCWNADLGH
EIFRSVVGLGGLGSGPELCVWSLLSLRCGTVVSADSTGSVQFWNGDNGTLLQTHSTHKGD
VNALAASPRQNRVFSAGSDGQVILYKLSSEMLQSRNDKSSYEMLKKWVFVGSVRAHTHDV
RALTMAVPICSEGSLSDEAKDLQDEKRKKVKRIRTREKKPLNFSYGKWAHFGVPMLVSAG
DDAKLFAYSAMEFTRFSPHDICPAPQRVPIHLVTGSRFNQTSFLFVQASCWLDVLSVNAP
DGGSGPYGGLVTTNIVARVKSKAGRKIICSAMSNSGEFFGYSDHIRPSLFELSRQAGQST
WTISKRQLPQKLPSAHSMIFTSDGSRLLIAGHDRRIYVVDLESLKLLHTFIPSRQEHEKE
GPPDEPPITKMFTSSDDQWLAAINCFGDIYLFNLEILRQHWFISRLDGASVTAGGFPPQR
NNVLIITTSSNQFYIFDVEARQLGEWSMQHSFTLPRRYQEFPGEVIGLSFCPSSSSHPSK
STSLVVYSARAMCSIDFGKAVDEDDESQLVHEALLKLQGSITNKKLKYLLIDGRQTESKH
TSRKNNFEIIGFRDPVLFIGHLSKNSILMVDKPWMEVVKSFDTTPVQRHIYGT
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgctccccaaagcttacagaaccagctcaatcgactggaagccgtctccggttgtcgcc
cttgctaccagccccgacggctcccaggttgcggccgctcgtgatgatggctccctcgag
atttggctcgtctctccaggctctgttggctggcatcatcagctgactattcatggggat
tctacttgtcgagtttcctcgctggtgtggtgttgcgttggttcaaaaggcccgtctcct
ggcaggttgttctcctcgagtattgatggctcagtctcggaatgggatcttttcgacttg
aagcagaagattttgctagagtcaattggagtttcaatctggcagatggctgtggcaccg
attaatagactgccaactcatgaagagactaggtctcagaattttggaaatggttatttg
aatgataaatatgaatgcgatgatactgatgatgatgaaaactgtgaaagtgaagatgtt
tcagactcagaacaagtttatcagaaactagttatggaagatagatgtgtagcaattgct
tgtgatgatggagctgtgcgaatgtacactatttctgatcttgataagttaatctaccaa
aaatcattgcctagggttagtggacgtgctctaagtgtgacctggagtcatgactcaaat
aggatatattcagggagtagcgatgggttaattagatgctggaatgctgatttgggtcat
gaaattttcagaagtgtagtaggtcttggaggtttgggcagtgggcctgagctttgtgta
tggtcattactttctttgaggtgcggaactgttgttagtgcagacagcaccggatctgtt
cagttctggaatggtgataatgggactcttcttcagacacattctacccacaaaggtgat
gtgaatgccttggcagcatctccaaggcagaacagggtattttctgctgggtctgatgga
caggttattctttataagctttccagtgagatgcttcagtctcgtaatgacaaatcttct
tatgaaatgttgaagaaatgggtgtttgttggttctgtaagggctcatacccatgatgtc
agagccttgacaatggcagtgcctatatgttctgaaggttctttatctgatgaggcaaaa
gacttgcaagacgaaaagaggaaaaaagtaaaaagaatccgaactcgggagaagaagccc
ctcaattttagttatggtaaatgggctcattttggagttcccatgcttgtatctgctggt
gatgatgcgaagctttttgcctactctgctatggagttcactaggttctccccacatgat
atttgccctgcacctcagagagttccaatacatcttgtcactggctcaaggttcaaccaa
acttcttttctctttgtccaggcttcttgttggttagatgtactctctgttaatgctcct
gatgggggttctggcccatatggtggtctggtgaccactaatatagtagctcgggttaag
agtaaggcaggtcgaaaaatcatttgcagtgcaatgtctaactcaggggagttttttggt
tattctgatcacatcagacctagtctatttgaactaagtaggcaagctggccaaagtaca
tggaccattagtaaaaggcaacttcctcaaaaacttccatctgcacattctatgattttt
acctctgatggatcacggttgctgatagcagggcatgatagaaggatctatgttgtggat
ttggagagcttgaaacttctgcataccttcattcctagtcgtcaggagcatgagaaggaa
gggccccctgatgagcctcccataacaaaaatgttcacaagttctgatgaccagtggtta
gctgctatcaactgctttggagatatatatttattcaatctggagatactgaggcaacac
tggtttatatcaagattggatggtgcctctgttactgccggtggctttcctcctcagaga
aataacgtgcttattatcacaacatcctcaaaccaattctatatatttgatgtggaagct
agacaattgggagaatggtcgatgcagcattcatttactcttcccagaagataccaagaa
tttcctggggaggttattgggttatctttctgcccttcatcatcctcccatccatcaaaa
tcgacatctcttgttgtttacagtgcaagggcaatgtgttcaattgactttggaaaggca
gtagatgaagatgatgaaagtcagttggtacatgaagcattgttgaagcttcaaggctct
atcaccaataagaaattgaaatatttgttgatagatggtcgtcaaacagagtcaaaacat
actagtagaaaaaataattttgagataattggttttagagacccagttttatttattgga
cacctttctaaaaattccatcttgatggtagacaaaccatggatggaagtggttaaatct
tttgatactacccctgttcagagacatatatatgggacataa
DBGET
integrated database retrieval system