KEGG   Gossypium hirsutum (upland cotton): 107914534
Entry
107914534         CDS       T04793                                 
Name
(RefSeq) RING-H2 finger protein ATL74-like
  KO
K19040  E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107914534
Enzymes [BR:ghi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107914534
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    107914534
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-rbx1 zf-RING_UBOX zf-ANAPC11 zf-RING_5 FANCL_C zf-C3HC4_3 zf-RING_4 Prok-RING_1 Zn_ribbon_TFIIB zf-RING-like zf-Nse Zn_Ribbon_TF zf_RING_Vps8_fungal STPRs zf-AtTam37 HemY_N APOBEC1 Zn_ribbon_IFT122_C
Other DBs
NCBI-GeneID: 107914534
NCBI-ProteinID: XP_016698967
UniProt: A0A1U8K8Z8
LinkDB
Position
D10:complement(19080354..19081963)
AA seq 196 aa
MLSASVNMHRRLLGTEVSLPPENGNKTHDSYLSETNFDTNLVVILAALLCALICAVGLNS
IVRCALRCSRRFATETPEQAAARLATTGLKKRDLRQIPVAVYGEGVSLPSTECPICLGEF
VDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNCRHSLLEVDASKTETSQQVTSLRQPQN
GLGGDHPNGSVVVVVG
NT seq 591 nt   +upstreamnt  +downstreamnt
atgttatcagcaagtgtgaatatgcatcgacgcctgcttgggacagaagtgagcttgcca
ccggaaaatgggaacaaaactcatgattcctaccttagcgagacaaatttcgacaccaac
ttggtggttatattggcagctcttttatgcgctctgatctgtgcagtggggttgaactct
atagtccgttgcgctctacgttgcagccgaaggtttgcgacggagaccccagaacaagca
gctgctcgcttggcgacaacaggcctgaagaaacgagatttgagacaaatcccggtggca
gtgtatggggaaggcgtgagtttgccgtcgacggagtgcccaatatgcctgggagagttc
gttgatggagaaaaagtaagagtgttgccaaaatgcaaccatgggtttcatgtgaggtgc
attgatacatggctgctctcacactcatcttgcccgaattgtcggcactcgttacttgaa
gtcgatgcatcaaaaaccgagacatcccagcaagtcacttccctacggcaaccacagaat
ggattaggtggtgatcatccaaacggcagcgtcgttgtcgttgttggatag

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