Gossypium hirsutum (upland cotton): 107914561
Help
Entry
107914561 CDS
T04793
Name
(RefSeq) regulatory-associated protein of TOR 1 isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107914561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107914561
Membrane trafficking [BR:
ghi04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
107914561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
HEAT
Beta-prop_TEP1_2nd
Beta-prop_EML
PEP5_VPS11_N
HEAT_2
Beta-prop_DCAF4
EIF3I
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
107914561
NCBI-ProteinID:
XP_040958106
LinkDB
All DBs
Position
D10:20305790..20316987
Genome browser
AA seq
1364 aa
AA seq
DB search
MALGDLMTSRFSQLSLAVSNHVMDGNGSNGDYLEDAASADMASQRRDFDTASTSSYANAV
ASSATVPTTMAYLPQTIVLCELRHAAFEASTPTGPSDSGLVSKWRPKDRMKTGCVALVLC
LNISVDPPDVIKISPCARMECWIDPFSMAPQKALETIGKNLRDQYERWQPKARCKVELDP
TVDEVKKLCNTCRRYAKSERVLFHYNGHGVPKPTANGEIWLFNKSYTQYIPLPISDLDSW
LRTPSIYVFDCSAAGMIVNAFIELLDSGTSSYPGSARDCILLAACEAHETLPQSAEFPAD
VFTSCLTTPIKMALRWFCTRSLLHESLDCSLIDKIPGRQNDRKTLLGELNWIFTAVTDTI
AWNVLPHELFRRLFRQDLLVASLFRNFLLAERIMRSANCSPVSYPMLPPTHQHHMWDAWD
MAAEICLSQLPALVEDPNAEFQPSLFFTEQLTAFEVWLDHGSEHKKPPEQLPIVLQVLLS
QCHRFRALVLLGRFLDMGPWAVDLALSVGIFPYVLKLLQTTTPELRQILVFIWTKILALD
KSCQVDLVKDGGHVYFIRFLNSVEAYPEQRAMAAFVLAVIVDGHRRGQEACIEAGLIHVC
LKHLHSSMQNDVQTEPLFLQWLCLCLGKLWEDFTEAQIIGLQADAPAICAPLLSEPQPEV
RASAVFALATLLDIGFDSFRDGVGGDEECDDDEKTRAEIIVIIKSLLNIVSDGSPLVRAE
VAVALARFAFGHKQHLKSIAAAYWKPQSNSLLSSLPSLANINGTGSGNIVSSQIGPLIRV
GNDNSSVVRDGRVSTSSPLATAGVMHGSPLSDDSSQHSDSGILNDGISNGVIRHSRSKPL
DNAMYSQCVPAMCTLAKDPSPRIATLGRRVLSIIGIEQVTKSVKSAGSSSARPGEPTTSS
TTPSFAGLARSSSWFDMNGGHLPLTFRTPPVSPPRQNFLTGMRRVCSLEFRPHLMNSPDS
GLADPLLGSSSGVSERSLLPQSTIYNFSCGHFSKPLLTASDDSEELLAIREERERFALER
IAKCQHSSVSKLNNNSQIASWDTRFETGTRTALLQPFSPIVIAADESERIRVWNYEEATL
LNGFDNHDFPEKGISKLCLLNELDESLLLVASGDGNIRIWKDYTVRGKQKLVTAFSSIQG
HKPGVRSLSTVVDWQQQSGYLYASGEISSVMIWDLDKEQLINSIPSSSDCSVSALASSQV
HAGQFAAGFVDGSVRLYDVRAPDMLVCATRPHTQQVERVVGIGFQPGLDQGKIVSASQAG
DIQFLDIRNQRDAYLTIDVHRGSLTALAVHRHAPIIASGSAKQLIKVFSLEGEQLGVIRY
QHTFMAQKIGSVSCLTFHPYQVLLAAGAADACVSIYADDNSQTR
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggcgatctgatgacgtcacggttttcgcaattgtcgttggcagtatccaat
catgtcatggacggcaacggcagcaatggcgactaccttgaggatgctgcttctgccgac
atggcctctcaaaggagggattttgatactgcatccaccagtagttatgccaatgccgtt
gcatcctccgccacagtgcctacaactatggcttacttgcctcaaactattgtcttatgc
gagcttcggcatgctgcgtttgaagcttccactcctactggaccctctgatagtggcctt
gtctccaaatggcgacccaaggatcgaatgaagacaggatgtgtagcactagttttatgt
ttaaatattagtgttgatccacctgatgtaataaagatatctccttgtgcaagaatggag
tgttggattgatcctttttctatggcaccacaaaaagctctcgaaaccattgggaaaaat
ttgagagatcaatatgagaggtggcagcccaaggcacggtgcaaggttgagcttgatcct
acagtggatgaagtgaagaaactttgtaatacatgtcgtagatatgccaagtcagagaga
gttctatttcattataatggacatggtgttccaaagccaactgcaaatggtgaaatctgg
cttttcaataagagttatacacagtatattcccttgcctatcagtgaccttgattcatgg
ttaagaacaccttctatttatgtttttgattgctctgcggctggaatgattgttaatgcc
ttcattgagcttcttgactctggcacttctagttaccctggatctgcacgagattgcatt
ctgctggctgcatgtgaagcacatgagacacttcctcaaagtgctgaatttcctgctgat
gtgtttacttcttgtcttactacacctatcaaaatggcattgagatggttttgcacacgt
tcgttgcttcatgagtctcttgactgttctcttatagataaaattcctggccgccaaaat
gatcgtaaaacacttctaggggagttgaattggatttttactgcagtaacagacacaatt
gcttggaacgttctccctcatgagcttttccggagattgtttaggcaggatctactagtt
gccagtttgttcagaaattttttgcttgctgagaggattatgcgctctgcaaattgttct
ccagtttcttacccaatgttgccaccaactcatcagcaccatatgtgggatgcatgggac
atggctgctgaaatttgcctttctcagcttccagcattggtcgaggatcctaatgcggag
ttccagccaagtctcttttttactgaacagctgacagcttttgaggtatggcttgaccat
ggatctgagcataaaaagccaccggagcaattgcctatcgttcttcaggttttacttagt
caatgccatagattccgtgcactggttcttcttggaagattccttgatatgggaccatgg
gctgtagatctggccctttctgttggaatattcccctatgtgctgaagctgttgcaaaca
accacaccagaactgcgtcaaatccttgtcttcatatggacaaaaattttggcccttgat
aagtcatgtcaggttgatctggtaaaagatggcggtcatgtttatttcattaggtttctt
aatagcgtggaagcatatcctgaacagcgagcaatggctgcatttgttctagctgtcatt
gtggatgggcatagacggggccaggaagcctgtattgaggcagggttgatccacgtgtgc
ttgaagcaccttcacagttccatgcaaaatgatgtgcaaaccgaacccttgttccttcag
tggctttgcttgtgtcttgggaagctctgggaggattttactgaggctcaaataataggt
ttgcaggcagatgcacctgcaatatgcgctcctcttctttctgagccgcagcctgaagtt
agggcttctgcagtttttgcattggctaccttgcttgacattgggtttgattcattcaga
gatggtgttggaggggatgaagaatgtgatgatgatgaaaagactagagccgagattatt
gttattattaaaagccttctgaatattgtttctgatggtagccctcttgtcagagcagaa
gtagctgtagctctagcaaggtttgcctttggacataagcagcatctcaagtcaattgct
gctgcatattggaaacctcaatctaattccttgttgagttcattgccttcgctggctaat
ataaatggcacaggaagtgggaatatagtttcatcccagataggccctttaattcgtgta
ggaaatgacaactcatctgtagttcgggatggaagggtttccaccagcagtcctcttgct
actgctggagtcatgcatggatctcctttatctgatgattcatctcaacattctgattct
gggattttgaatgatggtattagtaatggagtcattcgtcattcaaggtcaaaacctttg
gacaatgcaatgtattcacagtgtgtaccggctatgtgtactttagctaaggacccttct
ccacgcatagcaactctaggcaggcgggttctttcaattattgggattgaacaagtgaca
aaatctgtgaagtctgctggtagcagcagtgctaggcctggtgagcctacaacttcctca
acgactcctagttttgctgggttagctcgttcttcttcatggtttgacatgaatggaggt
catctgcctttaacgttcagaactcctcctgttagcccccctcggcaaaattttttgaca
ggaatgcgtagagtttgctctttagaattcaggcctcatctgatgaattctccggactcc
ggattggctgacccacttctagggtcttcttctggggtttctgagcgcagtttacttcca
caatcaactatctataattttagttgtggccacttctcaaagccacttcttactgcatca
gatgatagtgaagaactattggctataagagaagagcgggagagatttgcactggagcgt
attgctaaatgtcagcactcctctgttagcaaacttaacaataatagtcaaattgctagt
tgggatacaagattcgagacaggtacaagaacagcattgctgcaacctttctctcctatt
gttatcgcggcagatgagagtgaacggatcagggtatggaattatgaggaagccaccctt
ctcaatggttttgataatcatgattttccagagaagggaatttctaaactttgtcttttg
aatgagcttgatgaaagcttgttgcttgttgcttcaggtgatggaaatatacggatttgg
aaagattatacagtcaggggcaaacagaaactcgttactgcattttcttctattcaaggt
cacaaacctggtgtgcggagtttgagtactgttgtggactggcagcagcagtctggatat
ctttatgcatctggagagatatcatctgtcatgatctgggacctggataaggagcaactt
attaattcaataccatcctcctcagattgcagtgtctcagcattggcttcttctcaagtt
catgctggtcaatttgcagccggttttgtggatggttctgtcagactctatgacgtccgg
gcacctgacatgctggtttgtgcaactagaccacatacccagcaagttgaaagagttgtg
ggtattggctttcagcctggacttgatcaaggaaagattgttagtgcttcccaggcaggt
gatattcagtttcttgatattagaaaccaaagagatgcttaccttacaatcgatgtgcac
agaggctcacttacagctctagctgttcatagacatgccccgataattgccagtgggtca
gcaaaacagctaatcaaagtcttcagtctggaaggcgagcaactaggcgtcattcggtac
caacataccttcatggcccagaagattggttctgtgagctgccttaccttccatccctac
caagtattgcttgctgctggtgctgcagatgcgtgtgtttctatctacgctgatgacaat
tctcagacaagatga
DBGET
integrated database retrieval system
