Gossypium hirsutum (upland cotton): 107914639
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Entry
107914639 CDS
T04793
Name
(RefSeq) RAN GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107914639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107914639
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
107914639
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_1
LRR_4
DUF5423
Motif
Other DBs
NCBI-GeneID:
107914639
NCBI-ProteinID:
XP_016699097
UniProt:
A0A1U8K9D5
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Position
D08:10155224..10158897
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AA seq
538 aa
AA seq
DB search
MESGTQAFQQRSLSVKLWPPSHGTRLMLVERMTKNLTTPSIFSRKYGLLSNEEAEEDAKK
IEELAFAAADQHYKKEPDGDGSSAVQVYAKESSRLMLEAIKRGPTVKDEEIADKTSIHET
VFDISGGRRAFIDAEEAEEILKPLREPGNSYTKICFSNRSFGLDAANVAAPLLSSVKQQL
TEVDLSDFIAGRPESEALEVMNLFSSVLEGCQLRYLNLSNNALGEKGVRAFGALLKSQNN
LEELYLINDGISEEAAQAVSELIPSTKKLKVLHFHNNMTGDEGAIAISDIVKRSPALEDF
RCSSTRVGTDGGVALAEALKTCTRLKKLDLRDNMFGVGAGVALSKALSLFAGLTEVYLSY
LNLEDDGAEALANALKESAPSLEVLDMAGNDITAKGAASLAACIASKQFLSKLNLAENEL
KDEGAILIGKSLGEGHGQLNEIDMSTNAIRRAGARLLAQVVVKIPGFKLLNINGNFISDE
GIDEIKELFKSSPDMLGSLEDNDPEGEDYEDEDEDEENAEEGNELESKLKDLKIEQGE
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggaatctggaacgcaagcatttcaacaacgctcgctgtcagtgaaattgtggccacct
agtcatggtacaaggctgatgcttgtagagcggatgacgaagaatcttacaaccccatcc
attttctctagaaagtatggcctattaagtaatgaagaggctgaggaggatgctaagaaa
atagaagagttagcttttgctgctgcagatcaacattacaagaaggagcctgatggtgat
ggtagttctgcagtgcaagtatatgccaaagaatcgagtagactgatgctggaagctatt
aaaagaggccctactgtaaaggatgaagagatagctgataaaaccagtattcatgaaact
gtctttgatatatctggaggtcgcagggcatttatagatgcagaggaggctgaggagatt
ctgaagccacttagagagccaggaaattcatatactaagatatgttttagcaacagaagt
tttggcttggatgcagcaaatgttgctgcacccctcttgtcatccgttaagcaacaatta
actgaggtagacctttcagattttattgctggaaggccagagtctgaagcacttgaagtc
atgaatcttttttcttctgtcctggaaggttgtcagttaaggtacctgaacctttcaaac
aatgccttgggtgaaaagggtgttcgggcatttggggctctcctgaagtcacagaataat
ttggaggagctttatttgattaatgatggtatttcagaagaagctgcacaagcagtttct
gagctaattccttctaccaaaaagctgaaagttcttcattttcacaataacatgacaggg
gatgaaggtgcaattgctatctctgatattgtgaaacgttctcctgcattggaggatttc
cggtgttcatctacaagagttggcactgatggtggtgtggctctagctgaagcactgaag
acatgtacccgcttaaagaagcttgatctgcgtgacaacatgtttggtgtgggagctgga
gttgctttgagcaaagctctctctctgtttgcaggtcttactgaggtttacctcagttac
ttgaacctagaggatgacggggcagaagcacttgccaatgctctgaaagagtctgcacct
tcacttgaagttctggacatggctggaaatgacattacagccaaaggtgcagcttcttta
gcagcctgcattgcatcaaaacaattcctctcaaaattaaacttggctgagaatgaactc
aaggatgaaggtgctattttgattggtaagtcattaggggagggtcatggtcagttgaat
gaaattgatatgagcacaaatgctattaggagagctggggcaaggcttttggcccaagtg
gttgtgaaaatacctggatttaagttgctgaatatcaatggaaatttcatatctgatgaa
gggatagatgagattaaagaattgtttaaaagttcccctgacatgcttggttctttggag
gacaatgatccagaaggagaagattatgaggatgaagacgaagacgaggagaatgcagaa
gaagggaatgaattggagtccaagcttaaggatctcaagatcgagcaaggagagtag
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