KEGG   Gossypium hirsutum (upland cotton): 107914639
Entry
107914639         CDS       T04793                                 
Name
(RefSeq) RAN GTPase-activating protein 1
  KO
K14319  Ran GTPase-activating protein 1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107914639
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107914639
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     107914639
SSDB
Motif
Pfam: WPP LRR_6 LRR_1 LRR_4 DUF5423
Other DBs
NCBI-GeneID: 107914639
NCBI-ProteinID: XP_016699097
UniProt: A0A1U8K9D5
LinkDB
Position
D08:10155224..10158897
AA seq 538 aa
MESGTQAFQQRSLSVKLWPPSHGTRLMLVERMTKNLTTPSIFSRKYGLLSNEEAEEDAKK
IEELAFAAADQHYKKEPDGDGSSAVQVYAKESSRLMLEAIKRGPTVKDEEIADKTSIHET
VFDISGGRRAFIDAEEAEEILKPLREPGNSYTKICFSNRSFGLDAANVAAPLLSSVKQQL
TEVDLSDFIAGRPESEALEVMNLFSSVLEGCQLRYLNLSNNALGEKGVRAFGALLKSQNN
LEELYLINDGISEEAAQAVSELIPSTKKLKVLHFHNNMTGDEGAIAISDIVKRSPALEDF
RCSSTRVGTDGGVALAEALKTCTRLKKLDLRDNMFGVGAGVALSKALSLFAGLTEVYLSY
LNLEDDGAEALANALKESAPSLEVLDMAGNDITAKGAASLAACIASKQFLSKLNLAENEL
KDEGAILIGKSLGEGHGQLNEIDMSTNAIRRAGARLLAQVVVKIPGFKLLNINGNFISDE
GIDEIKELFKSSPDMLGSLEDNDPEGEDYEDEDEDEENAEEGNELESKLKDLKIEQGE
NT seq 1617 nt   +upstreamnt  +downstreamnt
atggaatctggaacgcaagcatttcaacaacgctcgctgtcagtgaaattgtggccacct
agtcatggtacaaggctgatgcttgtagagcggatgacgaagaatcttacaaccccatcc
attttctctagaaagtatggcctattaagtaatgaagaggctgaggaggatgctaagaaa
atagaagagttagcttttgctgctgcagatcaacattacaagaaggagcctgatggtgat
ggtagttctgcagtgcaagtatatgccaaagaatcgagtagactgatgctggaagctatt
aaaagaggccctactgtaaaggatgaagagatagctgataaaaccagtattcatgaaact
gtctttgatatatctggaggtcgcagggcatttatagatgcagaggaggctgaggagatt
ctgaagccacttagagagccaggaaattcatatactaagatatgttttagcaacagaagt
tttggcttggatgcagcaaatgttgctgcacccctcttgtcatccgttaagcaacaatta
actgaggtagacctttcagattttattgctggaaggccagagtctgaagcacttgaagtc
atgaatcttttttcttctgtcctggaaggttgtcagttaaggtacctgaacctttcaaac
aatgccttgggtgaaaagggtgttcgggcatttggggctctcctgaagtcacagaataat
ttggaggagctttatttgattaatgatggtatttcagaagaagctgcacaagcagtttct
gagctaattccttctaccaaaaagctgaaagttcttcattttcacaataacatgacaggg
gatgaaggtgcaattgctatctctgatattgtgaaacgttctcctgcattggaggatttc
cggtgttcatctacaagagttggcactgatggtggtgtggctctagctgaagcactgaag
acatgtacccgcttaaagaagcttgatctgcgtgacaacatgtttggtgtgggagctgga
gttgctttgagcaaagctctctctctgtttgcaggtcttactgaggtttacctcagttac
ttgaacctagaggatgacggggcagaagcacttgccaatgctctgaaagagtctgcacct
tcacttgaagttctggacatggctggaaatgacattacagccaaaggtgcagcttcttta
gcagcctgcattgcatcaaaacaattcctctcaaaattaaacttggctgagaatgaactc
aaggatgaaggtgctattttgattggtaagtcattaggggagggtcatggtcagttgaat
gaaattgatatgagcacaaatgctattaggagagctggggcaaggcttttggcccaagtg
gttgtgaaaatacctggatttaagttgctgaatatcaatggaaatttcatatctgatgaa
gggatagatgagattaaagaattgtttaaaagttcccctgacatgcttggttctttggag
gacaatgatccagaaggagaagattatgaggatgaagacgaagacgaggagaatgcagaa
gaagggaatgaattggagtccaagcttaaggatctcaagatcgagcaaggagagtag

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