KEGG   Gossypium hirsutum (upland cotton): 107914671
Entry
107914671         CDS       T04793                                 
Name
(RefSeq) pre-mRNA-splicing factor 18
  KO
K12817  pre-mRNA-splicing factor 18
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107914671
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    107914671
Spliceosome [BR:ghi03041]
 Complex C
  Other components
   Step II factors
    107914671
SSDB
Motif
Pfam: Prp18 PRP4
Other DBs
NCBI-GeneID: 107914671
NCBI-ProteinID: XP_016699150
UniProt: A0A1U8K9I0
LinkDB
Position
D08:complement(9994206..10001006)
AA seq 418 aa
MDLLKEELLKKRQSLAQNTGEKRVFKRSEIEQKQIQKLREQEKRELEAKSHRQSTASPSN
VSDTSAKPNPSASSTASTIATSTAGSSKSLTDEQNIDNLDLPRQEVIRRLRFLKQPITLF
GEDDAARLERLKYVLKAGLFEVDSDMTDGQTNDFLRDIAELRKRQKTGILSDRKRKDREE
GEGGGQDREEEGGGGGGELSGDGGSSGVDMDKDLKRMKANFDELCDEDKILVFFKRLLNE
WKQELDDMGEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCM
KRDYLAAMDHYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSV
KRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERDSRVSSSDDKLRLMPTPTDT
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggatcttctcaaagaagagcttctcaagaaacggcaaagtttagctcagaataccggc
gaaaagcgcgtattcaaacgctccgagatagaacaaaagcaaatccaaaagcttcgcgag
caagaaaaacgcgaactcgaagcgaaatctcaccgccaatccactgcatccccctccaat
gtcagcgatacttccgccaaacctaacccctccgcttccagcacggcatccacaattgca
acttccaccgccggttcctccaaatccctcaccgatgaacaaaacattgacaacctcgac
cttccaaggcaagaagtcatccgccgccttcgcttcctcaaacaacctattacgctcttc
ggcgaagatgacgcagctcgtctcgaaaggttaaaatacgtcttaaaagcaggtcttttc
gaggtcgacagcgatatgactgacggtcaaaccaatgacttcttgagagacattgccgag
ctgcggaagcggcagaagacggggattttgagcgataggaagagaaaggatagggaagaa
ggggaaggaggaggacaggatagggaagaagaagggggaggaggaggaggagagttgagt
ggtgatggtgggtccagcggagtcgatatggataaggatttgaaaagaatgaaggcgaat
ttcgatgagctgtgtgatgaagataagattctggtgtttttcaagaggttgttgaatgag
tggaaacaggagctggatgatatgggtgaggctgaaaagagaacggcaaaagggaagtcc
atggtagccacgtttaagcagtgcgctcgttacttgaatccattgttcaagttctgtagg
aagaaggtgcttcctgatgatatccgtcaagcattgttggtggtggttgaatgctgcatg
aagagggactacctggctgccatggaccattacattaagatggctatcggtaatgcgccc
tggccaattggtgtcactatggttggtatccatgaacgttcagctcgtgagaagatctat
accaatagtgttgcccacataatgaacgatgagactactcgcaaatacttgcaatcagtg
aaaaggctaatgaccttttgccaacgacgatatcctacccttccatctaaagcagttgag
ttcaacagcttggctaatggtagtgatttacagtcattgctagcagaagagagggattcc
agggttagttcctcagatgacaagcttaggttaatgcccactccaacggacacctga

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