Gossypium hirsutum (upland cotton): 107914671
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Entry
107914671 CDS
T04793
Name
(RefSeq) pre-mRNA-splicing factor 18
KO
K12817
pre-mRNA-splicing factor 18
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107914671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107914671
Spliceosome [BR:
ghi03041
]
Complex C
Other components
Step II factors
107914671
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
Motif
Other DBs
NCBI-GeneID:
107914671
NCBI-ProteinID:
XP_016699150
UniProt:
A0A1U8K9I0
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Position
D08:complement(9994206..10001006)
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AA seq
418 aa
AA seq
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MDLLKEELLKKRQSLAQNTGEKRVFKRSEIEQKQIQKLREQEKRELEAKSHRQSTASPSN
VSDTSAKPNPSASSTASTIATSTAGSSKSLTDEQNIDNLDLPRQEVIRRLRFLKQPITLF
GEDDAARLERLKYVLKAGLFEVDSDMTDGQTNDFLRDIAELRKRQKTGILSDRKRKDREE
GEGGGQDREEEGGGGGGELSGDGGSSGVDMDKDLKRMKANFDELCDEDKILVFFKRLLNE
WKQELDDMGEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCM
KRDYLAAMDHYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSV
KRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERDSRVSSSDDKLRLMPTPTDT
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctcaaagaagagcttctcaagaaacggcaaagtttagctcagaataccggc
gaaaagcgcgtattcaaacgctccgagatagaacaaaagcaaatccaaaagcttcgcgag
caagaaaaacgcgaactcgaagcgaaatctcaccgccaatccactgcatccccctccaat
gtcagcgatacttccgccaaacctaacccctccgcttccagcacggcatccacaattgca
acttccaccgccggttcctccaaatccctcaccgatgaacaaaacattgacaacctcgac
cttccaaggcaagaagtcatccgccgccttcgcttcctcaaacaacctattacgctcttc
ggcgaagatgacgcagctcgtctcgaaaggttaaaatacgtcttaaaagcaggtcttttc
gaggtcgacagcgatatgactgacggtcaaaccaatgacttcttgagagacattgccgag
ctgcggaagcggcagaagacggggattttgagcgataggaagagaaaggatagggaagaa
ggggaaggaggaggacaggatagggaagaagaagggggaggaggaggaggagagttgagt
ggtgatggtgggtccagcggagtcgatatggataaggatttgaaaagaatgaaggcgaat
ttcgatgagctgtgtgatgaagataagattctggtgtttttcaagaggttgttgaatgag
tggaaacaggagctggatgatatgggtgaggctgaaaagagaacggcaaaagggaagtcc
atggtagccacgtttaagcagtgcgctcgttacttgaatccattgttcaagttctgtagg
aagaaggtgcttcctgatgatatccgtcaagcattgttggtggtggttgaatgctgcatg
aagagggactacctggctgccatggaccattacattaagatggctatcggtaatgcgccc
tggccaattggtgtcactatggttggtatccatgaacgttcagctcgtgagaagatctat
accaatagtgttgcccacataatgaacgatgagactactcgcaaatacttgcaatcagtg
aaaaggctaatgaccttttgccaacgacgatatcctacccttccatctaaagcagttgag
ttcaacagcttggctaatggtagtgatttacagtcattgctagcagaagagagggattcc
agggttagttcctcagatgacaagcttaggttaatgcccactccaacggacacctga
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