Gossypium hirsutum (upland cotton): 107914775
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Entry
107914775 CDS
T04793
Name
(RefSeq) DNA topoisomerase 3-beta-like isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03440
Homologous recombination
ghi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107914775
03460 Fanconi anemia pathway
107914775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghi03032
]
107914775
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107914775
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
107914775
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Topoisomerases
107914775
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
107914775
FA (Fanconi anemia) pathway
107914775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Cas6b_C
Motif
Other DBs
NCBI-GeneID:
107914775
NCBI-ProteinID:
XP_016699286
UniProt:
A0A1U8K9U8
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Position
D10:complement(25473793..25484316)
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AA seq
872 aa
AA seq
DB search
MSSPPKVLMVAEKPSIALSIASVLSRGQMSTRKGSTEVHEFNGKFLGFHAHYKVTSVIGH
VFSVDFPASYQDWNATNPLDLFQASVVKTEANPRAHISKHLSQEARGCGYLVLWLDCDRE
GENICFEVIECTRFPMNEAKKRVYRARFSSVTEKDILKAMDNLVEPNRHEALAVDARQEI
DLKVGVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWALR
PYIIQNGYELQLEWKRQKLFDIDVAMMFQKLVTEDGILEVIDVSEKQETKGRPSGLNTVN
LLKVASSALGYGPQTAMQIAERLYTQGFISYPRTESTAYPSSFDFKGTLKVLENNPSWSD
CVQRLLAEGYHKPRTGTDAGDHPPITPMRPATEDVLGNDAWRLYQYICQHFMGTVSPDCK
YVRTKVEFSIGGEFFHCIGQRVTVQGFTYIMPWLAINEKNLPQFTKGEKIEVSRVELYEG
ETSPPDYLSESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRRLVPTTLGITLIR
GYQCIDPDLCLPDIRSFIEHQITLVAKGQANHSRVVQHVLQQFKQKFCYFLQQIENMDAL
FEAQFSPLADSGRALSKCGKCLRYMKYISAQPQRMFCGTCEEVYYLPQKGTIKLYKELTC
PLDNFELLIFSMPGPEGKSFPLCPYCYNSPPFEGIGTLFGSAKIGSTGKLGKGAGMPCFL
CLHPTCRHSVVAQGVCACPECSGTLVLDPVSAPKWRLYCNKCNCLVLLPEGAHRIATTRD
RCAECDSTIIEVDFNKKTTPLEDGATLHTGCILCDELLHSLVEVKHGKSFSRGFGARGRG
RGRGTGRGRGGYRGRGRTAGKKVDPRMSFRDF
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgcctcccaaagttctaatggtggcggagaagcctagcatcgcactctccatt
gcttccgtactctctcgtggccagatgtcaacaaggaaaggtagtacggaagttcacgag
ttcaatgggaagtttcttggctttcatgcccattataaagttacttcagttattggacat
gtattcagtgtagattttccagcatcttatcaagattggaacgccactaatcctctggac
ctatttcaagcttcagttgtcaagacagaagcaaaccccagggctcatatttctaaacat
ttaagtcaagaagcgcgtggttgtggttatttggtactatggttggattgtgatcgtgaa
ggagagaacatttgttttgaagtcattgaatgtacgagatttccaatgaatgaggcaaag
aaaagggtttatcgtgctcggttttcttctgtgaccgagaaggacattttgaaggctatg
gacaacctggtggaaccaaacagacacgaggcacttgctgtggatgctcggcaagagata
gatttgaaagttggtgttgcatttacacgatttcaaactagttattttcaaggaaaatat
gggaatcttgactccagggttatctcctatggtccatgtcaaactcctacccttgggttt
tgtgtacagcgttatctgcaaattaatactttcaaacctgaaaagttttgggcattacgt
ccttatattattcagaatggttatgagctccagctagaatggaaacgtcaaaagttgttt
gacatagatgttgctatgatgtttcaaaagttggtgactgaggatggaattcttgaagta
attgatgtatcggaaaaacaggaaactaaaggtcgaccttctggtctcaacacagtaaat
cttttgaaggttgcttcaagtgcattaggctatggacctcagacagccatgcaaattgct
gaacgcttatacactcaaggtttcataagctatccgcgaactgaaagcacagcatatcct
tcatcatttgacttcaaaggcacgcttaaggtactagagaacaatccatcatggagtgat
tgtgtccaaagacttcttgctgaaggttatcataaaccacggacaggaacagatgctggt
gaccatcctcctataactccaatgcgaccagcaactgaggatgttcttgggaatgatgct
tggagattatatcagtatatctgtcaacattttatgggaactgtgtctcctgactgcaaa
tatgtgaggacaaaagtagaattttcaattggtggagaattcttccattgcattgggcag
cgtgtcacagtacaaggatttacatatattatgccatggttggccataaatgagaaaaat
ctaccccagtttacaaagggggagaaaattgaagtttcaagagtggagttatatgagggt
gaaacttcacctcctgattatctcagtgagagtgagctcatttctctaatggagaagaac
gggataggcacagatgcatcaatacctgtgcatataaacaacatatgtgaacggaactat
gttcaggttcaagctggtaggaggttggttccaactactttaggcataacattgataaga
ggctatcaatgtattgatccggatctttgtttgccagacatacgcagtttcattgagcac
cagatcactttggttgctaagggtcaggccaatcattctcgtgttgtgcagcatgtactc
caacaattcaagcaaaaattctgttattttcttcagcagatagagaacatggatgcattg
tttgaagcgcaattctctccgctagctgattcggggcgtgctcttagtaaatgtggtaaa
tgtttgcggtacatgaagtacatttctgcacaaccacaacgtatgttttgtggcacatgt
gaagaagtttactatcttcctcaaaaaggcacaatcaagttgtacaaggaacttacatgt
ccgctggataatttcgagcttttgatcttctccatgcccggtccggaaggcaagtcattc
cccctttgcccgtactgctataatagccctccatttgaaggaataggcactctctttggt
tccgcaaagatagggagtacagggaagttggggaagggagcaggcatgccttgcttcctc
tgcctacaccccacatgccgacattctgtggtggcccagggagtctgtgcttgccctgaa
tgcagcggaacactagttttagatccagtaagtgctccgaaatggagactgtattgcaac
aaatgcaattgccttgtcttactccctgagggcgctcaccgcattgccaccacccgagac
cgctgtgctgaatgtgactcaacaatcatagaggtagactttaataagaaaacaactcct
ttggaagatggagctacattgcatactggttgcattctttgtgacgagttgcttcattca
cttgtggaggtgaagcatggtaaatcatttagccgaggctttggtgcaagaggaagaggc
agaggaagaggaacaggtagaggtagaggtggatataggggaagagggcgcacagctgga
aaaaaggtcgaccctagaatgagtttccgagatttttga
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