Gossypium hirsutum (upland cotton): 107915173
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Entry
107915173 CDS
T04793
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107915173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107915173
Enzymes [BR:
ghi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107915173
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
107915173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
107915173
NCBI-ProteinID:
XP_016699823
UniProt:
A0A1U8KFT8
LinkDB
All DBs
Position
D10:complement(57523782..57540623)
Genome browser
AA seq
1178 aa
AA seq
DB search
METQRRKRPGQPPSVKELEELKELFKHHIESFDYMIDEGLEIMLKRVKPVQIFDPNSTKT
LRIWLDHPEIFPPQKDRSSKTSAGALLPFECRQAKISYTGSLHMDVCFQWNGGVVIREKV
NFGEFPIMLRSKRCYLQGANPEKLVACKEEAREMGGYFILNGLERVVRALILPKRNYPMS
LERNSFRERREGYTDKAVVIRCVRDDLSSVTVKLYYLRNGSARLGFWIQGKEYMLPVGIV
LKALIDTNDHEIYTKLTCCYNEKDGDIKGAVGSQLVGERAKIILDEVRHLALFTKDQCLL
HIGEHFQPVMEGMETESYSSVADAVLRNRIFVHLNDNNDKFNLLIFMVQKLFSLVDQTSA
PDNSDSLQNQEILLPGHLITIYLKEKLEDWLRKGKKLVEDKINNNSQNFDFCSLKDVKKV
MDKNSSKQIGTAIENLLKTGRLITQTGLDLQQRAGFTVQAERLNYLRFISFFRSVHRGAS
FAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYYNSQGNIRDFFKIR
MSILDVLVGVGMTTSWPKVDHAGPPRSLPVLLDGCVIGSLSSGEADKVVAHLRRLKVSAA
SVIPDDLEVGYVPLSLGGTYPGLYLFTSPSRFIRPVRNISIPSSDGKDIEHIGPFEQVFM
EIKCPDGGNGGRSTTFPATHEELMPTAMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAF
SLQALHSRADQKLYHLQTPQTPIVRTKTYTKYGLDDYPSGTNAIVAVLAYTGYDMEDAMI
LNKSAVERGMCRGQIYQTETIDLCEGKSNQGQRIFKREHSDKAISSFVDSDGLPYVGQVI
HGNEPYCSTINQVTNSKRVYNHKGSEMAIVDYVAVDTKNKQHLEKVNIRFRHPRNPIIGD
KFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSL
HGKFVDATPFSDAVKGANGKTETESESLVDELGSMLRARGFNCHGVEVLYSGVYGTELTC
EIFIGPVYYQRLRHMVSDKYQVRATGQVDQITRQPIKGRKRGGGIRFGEMERDSMLAHGA
AYLLHDRLHTCSDYHIADVCSLCGSILTTAIIQPQKRVVREIGGLPPARAPKKVMCHACQ
TSKGMETVAMPYVFRYLAAELAAMNIKMTIQLGSEAGG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcaaaggagaaagagaccggggcagccgccgagcgttaaagagctcgaagaa
ctaaaggagctattcaaacaccatatcgagtcattcgattacatgatcgatgaaggcttg
gaaattatgcttaaacgcgtcaagcctgtgcaaatattcgatcccaattccaccaaaacc
cttagaatctggctggatcatcctgagatatttccaccacaaaaggatcgatcttcgaag
acgtcagctggagcattgcttccatttgaatgtagacaagcaaaaatttcttatacgggg
agcttgcatatggatgtttgctttcagtggaatggcggagttgttataagagaaaaagtt
aattttggagaatttcccataatgttaaggtcaaaacgttgttacttgcaaggtgctaat
cccgagaaactggttgcttgcaaagaagaggcacgagaaatgggtggctatttcattctg
aatgggcttgagagagttgtccgggctttgatattgccgaaacggaattatcctatgagc
ttggaacggaattcatttcgcgaacgtcgggagggttatactgataaagcagttgtaata
aggtgtgtgagagatgacctgtcttctgtaacagttaagttatattatcttcgtaatggg
agtgcaagacttggattctggatacaggggaaggaatacatgcttcctgttggcattgta
cttaaggctctgattgacactaatgatcacgaaatttatacaaaattgacatgctgctat
aatgagaaagatggcgacataaagggagctgttggctcgcaacttgttggtgaaagagcc
aagattattcttgatgaagttcggcacttggcgctttttactaaggaccagtgtctactg
catattggggaacacttccaacctgtgatggaggggatggaaactgagagttattcttct
gttgctgatgcagtgctgaggaatcgcatatttgttcacttgaatgacaacaatgacaag
tttaatctgcttatctttatggtgcagaaacttttctcgcttgtagatcaaacttctgcg
cctgataactcagattctttgcaaaatcaggaaattttactgcctggccatctaattaca
atttaccttaaggagaaactggaagattggttgcgcaaaggaaaaaagcttgttgaagat
aagattaataacaacagccaaaattttgatttctgcagcttaaaagatgtcaagaaggtg
atggacaaaaattcttcgaagcaaattggtacagcaattgagaatttgttgaaaactgga
agattgataacacaaacaggtttagatttacagcagagggctggtttcacggttcaggca
gagaggcttaactacctacgatttatttcgttttttcggtctgttcatcgtggggcttca
ttcgctggacttcgaacaaccagtgttcggaagttgctacctgaatcttggggatttctt
tgcccagtgcacactcctgatggagagccttgcgggttactgaatcacatgacgtgtact
tgccgaattacatcgtactacaactcacaaggaaatattagagatttttttaaaataaga
atgtctattcttgatgtcctagttggggttggaatgacaacttcatggccaaaagttgat
catgctgggcctcctcgatctcttcctgttcttctagatggttgtgttattggctcttta
tcctctggtgaagctgacaaagttgttgctcatttgcggagattgaaagtgtcagctgct
tcagtgattcctgatgacttggaagtggggtatgttcctctaagcttgggtggcacatat
cctggtttgtacctgttcacttctccatctagatttattcggccagtcagaaatatttct
atcccatcttcggatgggaaggatattgaacatattgggccctttgaacaggttttcatg
gaaataaaatgtccagatggtgggaatggaggaagaagtactacttttcctgcaactcat
gaagaacttatgccaactgcaatgcttagtgtggttgctaatcttacaccttggtcagac
cataatcaaagtccacgtaacatgtaccagtgccagatggcaaaacaaacaatggctttt
tctttgcaagcactacattcacgcgcggatcaaaagctgtaccatcttcagactcctcaa
acaccaattgtgcgcacaaaaacatatacaaaatatggcttggatgattatccttcagga
actaatgcaatagtagcagtgcttgcatatacaggatatgatatggaagatgcgatgatt
ttgaataagtctgctgtggaacgtgggatgtgtcgtggacagatataccagacggaaact
attgacttgtgtgagggtaagagcaatcaaggacagagaatttttaaaagagaacattca
gataaggcaatatcttcttttgttgattccgatggacttccatatgttggccaggtcata
catggaaacgaaccatactgtagtaccattaatcaggtaacaaattcaaagagagtctac
aaccacaagggttcagaaatggctattgttgactatgttgcggttgataccaaaaataaa
cagcatcttgagaaggttaatattcgttttcgacatccaagaaaccctatcattggtgat
aaatttagcagcagacatgggcagaaaggtgtctgctctcagttgtggccagatattgat
atgccattctcaggagttacaggaatgcgccctgatctcataatcaatcctcatgcattt
ccttcaagaatgacgatagccatgcttttggaatctgttgctgctaagggaggaagctta
catgggaaatttgtggatgcaacaccgttttctgatgcagtcaagggagctaatggaaag
acagagacagagtctgagtctcttgttgatgaacttggttccatgttaagagctcgtggg
tttaattgccatggagttgaggtgttatacagtggggtttatggaacagaactaacatgt
gagatatttattggccctgtgtattatcagcgtcttagacacatggtttctgacaagtat
caggtccgtgccactggacaagttgatcagatcactcgacagccaattaaaggaagaaag
cgtggtggaggtatacgttttggagagatggaacgagactctatgcttgctcatggggct
gcatatttattacatgataggctccatacgtgttccgattatcacattgctgatgtctgc
tctctgtgtggaagcatccttactactgcaattatccagccacaaaagcgggtcgttaga
gagatcggcgggttgcctcctgctagggctccgaagaaggttatgtgtcatgcttgccaa
acaagcaaagggatggagacggtcgcaatgccttatgtttttagatatctggctgctgag
ttggcggctatgaacataaaaatgacaatacaactaggtagtgaagctggaggttga
DBGET
integrated database retrieval system
