Gossypium hirsutum (upland cotton): 107915700
Help
Entry
107915700 CDS
T04793
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog isoform X1
KO
K14569
ribosome biogenesis protein BMS1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107915700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107915700
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
90S particles
GTPase
107915700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
GTP_EFTU
AAA_16
MMR_HSR1
AAA
AAA_22
AAA_14
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
107915700
NCBI-ProteinID:
XP_016700314
UniProt:
A0A1U8KHZ6
LinkDB
All DBs
Position
D10:complement(58975149..58985739)
Genome browser
AA seq
1223 aa
AA seq
DB search
MAMDSGADGQSHKAHRSRHSGASAKKKTKAKNKDQNSDQKQQNPKAFAFRSNAKAKRLQS
RAVEKEQRRLHLPVIDRSYGELPPFVVVVQGPPQVGKSLLIKTLVKHYTKHNLPDVRGPI
TIVSGKQRRLQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPK
VMGVLTHLDKFKDVKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYPKREVHNLARF
ISVMKFPPLSWRTSHPYILVDRFEDVTPPERVQMNSKCDRNVTLYGYLRGCNLKKGTKIH
IAGVGDFSLAGVTGLSDPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYININD
HFVQYSKVDEMGGTTNKGNKRDVGEALVKSLQTIKNPIDEKLEKSKISLFSQNPNSSLEA
EDHNRDSDEAPKLIRDIEPLKQYQSNGEEDESEFDLDSSESSDQDEGVPEGAMLKSEGRN
FEEGNADASERLGRVKEQVEFHNGRKRRKAIFGDGVDHSNLKSTDEENEGDEDDDDDDDD
NDEGENDRSNEDNESCSGSEFSDGDEEDLKSEEDGMGNISKWRASLVERASKKQNINLMQ
LVYGKSASTSNTSANEVKDDSENEESDEDEFFKPKGQRAKNSIEGLDGGNINTEDCSKST
KFSELKNWKEEEVYESIRDRFVTGDWSKGALRNQMLEAKTEEDDMDGDFEDLETGEKHES
HQKDDSSNGGIQKEDDDAIEERRLKKLALRAKFDAHYDGSESPEEETDVQNGGKFHRSQA
NDSGYYDKLKEEIELQKQINIAELEDLDETTRLEIEGFRTGMYLRLEVHDVPFEMIEYFD
PCHPILVGGIGLGEENVGYMQTRLKRHRWHKKVLKTRDPIIVSIGWRRYQTTPVYAIEDQ
NGRHRMLKYTPEHMHCLAMFWGPLAPPKTGVLAVQNLSNNQAAFRIIATAYVLEFNHAAR
IVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQ
PKKKGGQAREGIARCTFEDRILMSDIVFLRAWTQVEVPQFYNPLTTSLQPRQKTWLGMKT
VAELRREHNLSIPVNKDSFYKPVERKARKFNTLVIPKALQADLPFESKPKNIPHRKRPLL
EDRRAVVMEPHERKVHALVQHLQLIRNDKMKKRKLKEEQKRKEVEAQRAKDEQVLRKRRR
EERQERYREQDKLKKKIRRHVEA
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggccatggatagtggcgctgatgggcagtctcacaaggctcaccgctctcgccactcg
ggtgcctctgcaaaaaagaaaaccaaagccaaaaacaaggatcaaaactccgaccagaag
cagcaaaatcctaaggcatttgcttttcgttccaatgcaaaagcgaagcgtttgcaatcg
cgtgccgttgaaaaagaacaacgtaggcttcatcttcctgttatcgatcgctcttatggc
gagctgcctccatttgtggtcgtggtgcaggggcctcctcaggttggaaagtctctttta
atcaagactctcgtaaagcattacacaaagcataatttacctgatgttcgaggaccaata
accatagtatcaggcaagcaacggcgcttgcagtttgttgagtgtccaaatgatatcaat
ggtatgattgatgctgcaaagtttgctgatctagcattgcttctaattgatggaagttac
ggctttgaaatggaaacatttgaattccttaacatattgcaagttcatggttttccaaag
gtgatgggagttcttactcaccttgataagtttaaggacgtaaagaaactaaagaaaaca
aaacagcgtctcaaacaccgtttctggacagaaatatatgatggagctaaattgttttat
ttatctggtctcattcacgggaagtatcccaagcgagaagttcacaatcttgcaagattt
atatctgttatgaagttccctcctttatcgtggaggacttctcatccgtatatcttggtt
gaccgttttgaagatgttactccccctgagagagtgcaaatgaacagtaaatgtgatagg
aatgttacgctttacggttatctgcgaggttgtaatttgaaaaagggaactaagatccat
attgccggtgttggagactttagcttggctggcgttacaggcctatctgatccttgccct
ttaccatcagctgcaaaaaagaagggactccgtgacaaagaaaaacttttttatgccccc
atgtctggacttggggatctcttgtatgacaaagatgccgtctacataaacattaatgac
cactttgttcagtattctaaagttgatgaaatggggggaactacaaataaaggaaataaa
cgagatgttggtgaggccctggtgaaatcacttcagactataaagaacccaattgatgag
aagttggaaaagagtaaaatttccctttttagtcagaatcctaatagctcattggaagct
gaagatcacaacagggattctgatgaagcaccaaagctaattcgtgatatagagcctttg
aagcaataccagtctaatggagaagaagatgaaagtgagtttgatctggatagttcagag
tcttcagatcaagatgaaggtgttccagaaggtgcaatgctgaaaagtgaaggtaggaat
tttgaagaaggaaatgcagatgcgtcagagcggctgggtcgagttaaggaacaagttgag
tttcacaatggtaggaaaaggagaaaagcaatctttggagacggtgttgatcatagtaat
ctcaagagtacagatgaagagaatgaaggtgatgaagatgatgatgatgacgacgatgac
aacgatgaaggtgaaaatgacagaagcaatgaagataacgagtcatgttcaggttcagag
ttttccgatggtgatgaagaggatctgaagtctgaggaagatggcatgggaaacatatca
aagtggagagcatcacttgtggaaagggcctctaaaaaacagaatataaacctgatgcag
cttgtatatgggaaatctgcatcaacatcaaacacttccgctaatgaagtgaaggacgac
agtgagaatgaagagagtgatgaagatgaattttttaagcccaaagggcaaagggcaaag
aattcgattgaaggattagatggtgggaacatcaacactgaggactgttcaaaatccact
aaattttcagaacttaagaactggaaagaggaagaagtatatgagagtattcgtgatcgt
tttgtcactggtgattggtctaaaggtgccctcagaaatcaaatgttagaagctaaaact
gaagaagatgatatggatggtgactttgaagatttagaaactggtgagaagcatgagagt
catcagaaagatgattctagtaatggtggaatccaaaaggaagatgatgatgcaattgag
gagcggaggttaaaaaagctagctctccgtgcaaaatttgatgctcattatgatggatcc
gaatcaccggaagaggaaactgatgtacaaaatgggggaaagtttcaccgcagtcaagcg
aatgacagtgggtattatgacaagttgaaagaagagattgaactccagaaacaaattaat
atagcagaactcgaggatcttgatgagactacccgattggaaattgagggattccgaaca
ggaatgtatctaaggctagaagttcacgatgttccttttgagatgatagagtattttgat
ccctgtcatcccattttggttggaggaattggtctcggtgaggaaaatgttggatacatg
cagacgaggctaaaacgacacagatggcacaagaaagtgctgaagactagagatccaata
attgtttcaattggatggaggcgttaccagaccacgcctgtttatgccattgaggaccaa
aatggaagacatcgcatgctcaagtatactccagaacatatgcattgccttgctatgttt
tggggccctcttgctccacccaagactggagtgcttgctgttcagaatttatctaacaat
caggcggcatttcgcatcatagcaacagcatacgtacttgagttcaaccatgcagcacgg
atagtgaaaaaaatcaagctagttggatacccctgtaaaatattcaagaaaacagccctc
atcaaggatatgtttacttcagatcttgaagtagctcggtttgagggtgcagcaattcga
actgtgagtgggatccgtgggcaggtgaaaaaggcagcaaaggaagagattggtaatcaa
cccaaaaagaagggagggcaagctagggaaggaattgcaaggtgcacctttgaggatcga
attttgatgagtgacattgtctttttgcgtgcatggactcaagttgaagttcctcagttc
tataatccattaactacttcgttgcaacctcgtcagaagacctggctaggaatgaaaact
gtcgcagaattgaggagagaacacaatctttctattcctgttaacaaggattccttctac
aagccagttgagagaaaggcaaggaaattcaatacccttgtgatccctaaggcgttacaa
gctgatctcccgtttgaatcgaagcccaagaatataccacaccggaaacgaccacttctt
gaagatagaagagctgttgtcatggagcctcatgaacggaaagttcacgctcttgttcaa
caccttcagttgattagaaatgacaagatgaagaagcggaagctcaaggaggagcaaaaa
cggaaagaagtagaggcacagagagcaaaggatgaacaggtgttgagaaagcgtcggaga
gaagaaaggcaagagagataccgggagcaggacaaactaaagaaaaagattcgcagacat
gtggaagcctga
DBGET
integrated database retrieval system
