Gossypium hirsutum (upland cotton): 107915821
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Entry
107915821 CDS
T04793
Name
(RefSeq) amino acid transporter AVT1C isoform X1
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107915821
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107915821
Transporters [BR:
ghi02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
107915821
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Motif
Pfam:
Aa_trans
Trp_Tyr_perm
Motif
Other DBs
NCBI-GeneID:
107915821
NCBI-ProteinID:
XP_016700509
UniProt:
A0A1U8KII8
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Position
D10:60845529..60851186
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AA seq
550 aa
AA seq
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MKTSVSDQSFCIESEDDEEVEKLEYNRNEEDEGNEEFYASFSSQRKNSSYATQWPQSYRQ
SIDLYSSVPSPTIGFLGTPTLSRLGSSFLSSSLTRRFTPESLNAPVKKPLLPPSVDDEIQ
PHKRSTYSLATPAPSRKPSVRFDEKVQVDHGHGIPLGRQSSYGQAVVNGINVLCGVGILS
TPYAAKEGGWLGLIILLTFAVLSFYTGLLLRQCLDSSPELETYPDIGQAAFGSTGRIALS
IILYVELYASCVDYIILEGDNLSSLFPNAHISLGGFDLNSRRLFSLMTTLAVLPTVWLRD
LSVLSYISAGGVVASFLVVFCLFWVGLVDQVGFQNKGTVLNLSTLPVAVGLYGFCYSGHA
VFPNIYTSMAEPRKFSSVLLSCFGICSLLYAGTAVMGYKMFGEATESQFTLNMPKDLVAS
KIAVWATIVNPFTKYALTLSPVAMSLEELLPPRHLKSHVYPMLIRTALVVSTLLVGLSVP
FFGLVLSLIGSLLTMLVTLILPPACYLSILRGKVGCIQATICIIIIAVGAVSSAFGTYSA
LTKIIQNLSS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaagacctcggtttcggatcagagtttctgcatcgagagcgaagacgatgaagaagtt
gagaaattagagtataatagaaatgaagaagatgagggaaatgaagaattttatgcttct
ttttcttcccaaagaaaaaacagttcttatgccactcaatggcctcaaagttacaggcag
tctattgatttgtatagtagtgtaccatccccgaccatcgggttcttgggcactcctaca
ctatcaagactaggaagttcgtttctttcatcatcgttaacccgaagattcacaccggaa
tcacttaatgcgccagtaaagaaaccgttgctaccaccatcagtagatgatgaaatacag
ccgcataaacgtagtacgtactctttggcaactccggcaccgtcgaggaaaccgtctgta
agatttgatgagaaagtacaggtcgaccatggtcatggaattccccttggtcgccagagt
tcatatggtcaagctgtggtaaatgggattaatgtgctatgtggagtaggaatcctttct
accccatatgctgccaaggaaggaggatggttagggctaataatattattaacatttgca
gtgctttctttttacactggcctccttttgcgccagtgtctggatagctcacctgagctt
gaaacttaccctgatattggtcaagctgcatttggttccaccggtagaatcgccctttca
ataattttgtatgtggagttatatgcttcttgtgttgactatataattctagagggtgat
aacttgtcatctttattcccaaatgcacacattagtttgggcggattcgatttgaactcg
cgtcgtctcttctcgttgatgacaacccttgctgttcttcccactgtttggctcagagac
ctcagtgtccttagttatatctctgctggtggagttgttgcatcattcttggtagtgttt
tgcttgttttgggttggattggtagatcaagttgggtttcagaacaaagggacagtattg
aatctttctacacttccagttgctgttggactttatggtttctgctattcaggccatgct
gttttcccgaatatatatacttcaatggcagaaccaagaaaattctcttcagttctctta
tcatgtttcggaatctgttctttgttgtatgctggaacagcagttatggggtacaaaatg
tttggagaagcaacagaatcacagtttacacttaacatgcctaaagacctggttgcttca
aagattgctgtgtgggctacgattgtcaacccatttaccaaatatgcattaaccttgtct
ccagtggcaatgagtcttgaggaattattaccaccacgccatctcaagtctcacgtgtac
cctatgttaattagaacagcactggtggtctcaaccttgcttgtaggtctcagcgttccc
ttcttcggcttggtattgtcattgataggatctttactcacaatgcttgttaccttgata
cttcctcctgcttgttatttaagcatactgaggggtaaagtaggctgtatccaggctaca
atctgtattataattattgcagtgggagcagtttcatcagcctttggaacttactcagca
ctcaccaagattattcagaatttgagtagctga
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