Gossypium hirsutum (upland cotton): 107915892
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Entry
107915892 CDS
T04793
Name
(RefSeq) RING-H2 finger protein ATL78-like isoform X1
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107915892
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107915892
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
107915892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_16
DUF2976
Motif
Other DBs
NCBI-GeneID:
107915892
NCBI-ProteinID:
XP_016700572
UniProt:
A0A1U8KDJ3
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Position
D10:complement(15772017..15772952)
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AA seq
203 aa
AA seq
DB search
MSISISTQVQCLLGDFHSRRLLMLHAPPSPTPTMAAPTNTETNHPYTGNNSFDANVIMVM
SVLLCAIMFTLVLNSIIRCVLRCSNLLASGSGASTSGQPPNRGINRKALKTFPTVNYSAD
LNMPGLDSECVICLSDFKPGDRVRLLPMCNHGFHVQCINKWLSCRSSCPKCRHCLVETCQ
KIVVFSSQASSSQPTPVQETAVP
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgtccatttccatctccactcaagttcaatgtttgcttggagatttccactctagaagg
ttgttgatgctgcatgccccaccttctccgacaccgactatggcagctcctacgaacacg
gaaaccaaccatccttacaccggaaacaacagctttgatgcaaacgttattatggttatg
tcagtcctcttgtgtgctataatgttcactttagtactcaattctatcattaggtgtgta
ttaaggtgttcaaatttactagcctcaggatccggagccagcacctcaggtcaaccacca
aatagagggatcaaccgaaaagccttaaagacctttccaacagtaaattattcggctgac
ttgaacatgcctggcttggactccgagtgtgtcatatgtctatcggatttcaaacccggt
gaccgcgttcggcttttaccgatgtgcaaccatggattccatgtccagtgcatcaacaag
tggctgagctgccgctcctcttgcccgaaatgtaggcactgcctcgtcgaaacatgccaa
aagattgttgtttttagcagccaagctagctcatcgcaacctactcctgtgcaggaaacc
gctgtgccatag
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