Gossypium hirsutum (upland cotton): 107916243
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Entry
107916243 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6-like isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107916243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107916243
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107916243
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
HECT type E3
107916243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
107916243
NCBI-ProteinID:
XP_016700887
UniProt:
A0A1U8KIW1
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All DBs
Position
D10:53793237..53803901
Genome browser
AA seq
1038 aa
AA seq
DB search
MFFTGDPSSRKRVDLGGRSSKERDRQKLLEQTRLERNRRLWLRRQNSAALTIQKYFRGRK
VVEAEHAKVREHFYQTYGKHCRNVDRHCFGPDSDFLRQLIFFFDAHNLNDFSVLVETCRL
IQNFVRDSGDTVGLFAGMDYSPNHSLVAYRLKLLSFACIQAIHQNRNQLKDQLLMAPEEA
TASTTILLQTLLLFLDPKLPWACKAVGYLMQRNVFSLFREVILMVKLNFVVKENISAGGS
FGKISTLERVLALMISHVGQSTCVCSNVDSQWSFSSQILTIPFIWQLFPYLKVVFASWRL
TLHYTNKMVLCVQNHANLLPTDISNKFPGYACLLGNILETAGAALSQPDCSFEMAMDLAA
VTTFLLDALPPIKSSSRESPTVAEDGMIIGDEIEEIVLDSNLEQQITNAIDSRFLLQLTN
VLFGGISAACDPHNEGPDDKEVAAVTAACAFLHVTFNTLPLERIMTVLAYRTELVPVLWN
FIKRCHHNQKWSPLPERFSYLLGDAPGWLLPLAVFCPVYKHMLMIVDNEEFYEQEKPLSL
KDVRCLIVILRQALWQLLWVIPSVHPTCGKSISNTSSHKRQLVETIQNRVGTVVSELLSQ
LQDWNNRQQFTPPSDFHADGVNDFFISQAAVEGSKAHDILKQAPFLIPFTSRVKIFTSQL
ASVRQRHWAHGVFTRNRFRIRRDHILEDAYNQMSQLSEEDLRGLIRVTFVNEFGVEEAGI
DGGGIFKDFMENITRAAFDVQYGLFKETADHLLYPNPGSGMIHEQHLQFFHFLGTLLAKA
MFEGILVDIPFATFLLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYKGDISELELYFVIV
NNEYGEQTEEELLPGGKNIHVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLMQKD
WIDMFNEHELQLLISGSLDSLDVDDLRCHTNYAGGYHGEHYVIDMFWEVLKSFSLENQKK
FLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLPPYRSKEQ
LEAKLMYAINADAGFDLS
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcaccggtgatccttccagtcggaagcgagttgatttgggtggtcggagctcc
aaggagagagataggcagaaacttctagaacaaacgcgattggagcggaatcgccgcctc
tggttgcgtcgccagaattccgcagctctcacgattcagaaatacttcagagggagaaag
gttgtggaagctgaacatgccaaggtccgagagcacttctaccaaacctacggaaagcac
tgccgaaatgtagataggcattgttttggtccagactcagattttctccgccagctaatt
ttcttttttgatgcccacaatttaaatgatttttcagttcttgttgagacttgccgatta
attcagaattttgttcgagatagcggggataccgttggactctttgcaggtatggactat
tcacccaatcattctttagttgcctacagactgaagctgctctcatttgcttgtattcag
gctatacatcagaacagaaatcaattgaaagatcaactgttgatggctcctgaggaggcc
actgcatcaacaaccatcttgcttcaaacattgcttttgtttttagatcctaaactgcca
tgggcatgtaaggcagttggttatctcatgcaaagaaatgtattctctctgtttagagaa
gttattctaatggtaaagcttaattttgtggtgaaggaaaatataagtgctggaggttct
tttgggaaaatatctacattggagcgtgtgcttgctcttatgatttctcatgttggtcag
agtacatgtgtttgctcaaatgtggattcacaatggagtttctcatcccagattcttaca
atccctttcatatggcaactttttccatacttaaaagtggtttttgcttcttggagattg
actctgcactacactaataagatggtcttgtgtgtgcaaaaccacgctaatttacttccc
actgatatatcaaataagtttcctggttatgcctgcctccttggtaatattttagaaaca
gcaggtgctgctttatctcagcctgactgctcatttgaaatggccatggaccttgcagct
gttacaactttcttgttggatgctcttcctcctataaaatcatcaagcagagaaagtcct
acagttgcagaggatggtatgatcataggtgatgaaatagaggaaatagttttggatagt
aatttggagcagcagataactaatgctattgattcacgctttctgctgcaattgactaat
gtgttgtttggagggatttccgctgcttgtgatccacataatgaaggaccagatgataag
gaggtggcagctgttactgctgcttgtgcttttctgcatgttactttcaatactttacct
ctagagagaatcatgactgtactggcctatagaactgaacttgttccagtgctttggaat
tttattaagcgatgtcatcataatcaaaagtggtcacccttgcctgagcgtttttcatat
ctcttgggagatgcacctggttggctgctacctctggccgttttctgtccagtgtataag
cacatgcttatgatagttgataatgaggagttttatgagcaggagaagccattgtctttg
aaggatgtcagatgcctaattgtcattctgagacaggcgttatggcagctcctatgggtg
attccttctgttcaccctacctgtgggaaatctatctccaatacttcttctcataagagg
caacttgttgaaactattcaaaatagggttggtactgtggtctcagagctcctatcccag
ttgcaagattggaataaccggcagcaatttactccgcccagtgactttcatgctgatggt
gtaaatgacttttttatttctcaggctgcggtggaaggcagcaaagcacatgacatattg
aagcaagcaccttttttgattccattcaccagcagagttaaaatattcacttctcaacta
gcatcagttaggcagagacattgggctcatggagtttttaccaggaaccgattcagaata
cgaagggatcatattttagaagatgcttataatcagatgagtcaattgtctgaggaggat
cttagaggactgattcgagtaacatttgtcaatgagtttggggtggaggaggctggcatt
gatggtggtggaattttcaaagattttatggagaatattactcgggctgcatttgatgtg
caatatgggttatttaaggaaacagctgatcacctcctatatccaaatcctggatctggg
atgatacatgaacagcatctccaatttttccatttcttgggaacactacttgcaaaggcc
atgtttgaagggattcttgtggatataccatttgcgacattcttattgagcaaattgaag
caaaagtacaattatttaaatgacttgccttctttggatccagaattatatcgccacctt
attttcttaaagcattataaaggggacatatcagagttggagctctactttgtaattgtg
aataatgaatacggcgaacaaacagaagaagagctgcttccaggaggcaaaaacatacat
gttacaaatgagaatgtcatcacatttattcaccttgtatctaaccaccgtttgaatttt
cagatacgtcagcaaagttctcatttccttaggggatttcagcagcttatgcagaaagat
tggattgatatgttcaatgaacatgaattgcagcttctgatttcaggttcacttgatagc
ttggatgttgatgaccttcgatgccacaccaattacgctggtggctatcatggcgagcat
tatgtcattgatatgttttgggaagtcctcaaaagcttttcactggaaaatcaaaagaaa
tttttgaagtttgtgactggttgttctcgaggacctttgctgggattcaaatatctcgaa
cctctattttgcatacaaagagctgctggaagtgcctctgaagaagcattggaccgatta
ccaacatcagctacttgtatgaaccttctaaagcttccaccatatagaagcaaagagcaa
ctggaagccaaattgatgtatgcaataaatgcagatgcgggttttgatttgagttga
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