KEGG   Gossypium hirsutum (upland cotton): 107916254
Entry
107916254         CDS       T04793                                 
Name
(RefSeq) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03030  DNA replication
ghi03410  Base excision repair
ghi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107916254
   03410 Base excision repair
    107916254
   03450 Non-homologous end-joining
    107916254
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ghi03032]
    107916254
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107916254
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    107916254
DNA replication proteins [BR:ghi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    107916254
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     107916254
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     107916254
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107916254
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc 5_3_exonuc_N HHH_5 PM2_P3
Other DBs
NCBI-GeneID: 107916254
NCBI-ProteinID: XP_016700902
UniProt: A0A1U8KER3
LinkDB
Position
D10:complement(54077603..54081854)
AA seq 383 aa
MGIKGLTKLLADNAPKAMKEQKLESYFGRKIAIDASMSIYQFLIVVGRMGTEMLTNEAGE
VTSHLQGMFTRTIRLLEAGLKPVYVFDGQPPDLKKQELAKRYSKRADATEDLQEAMETGN
KEDIEKFSKRTVKVTRQHNEDCKRLLRLMGVPVIDAPSEAEAQCAALCKSGKVYAVASED
MDSLTFGTPKFLRHLMDPSSRKVPVMEFDVAKVLEELNLTMDQFIDLCILSGCDYCDSIR
GIGGQTALKLIRQHGSIEEILQNINKERYSIPDDWPYEEARRLFKEPLVCMDDEQLEMKW
SPPDLEGLITFLVNENGFNIDRLTKGVEKIKAAKNKSSQGRLESFFKPVANTSAPIKRKE
IPEKTGKETNSKKLKAGGGRKKK
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgggtattaagggtttaacgaagcttctagcagacaatgcgccaaaggccatgaaggaa
cagaaattagagagctatttcggccgcaagattgccatcgacgccagcatgagcatttac
caatttctcattgtggtgggtcgtatggggactgaaatgctcaccaatgaagccggtgaa
gttaccagtcatttgcaaggcatgtttactcggacaattcggcttcttgaagctgggctt
aaacctgtctatgtttttgatgggcagcctccagatttaaaaaaacaagagcttgctaag
cgttactcaaagagggcagatgctactgaggatttgcaagaagccatggagactggaaat
aaggaggacattgaaaaattcagcaagcggacagtaaaagtgacaaggcagcataatgaa
gactgtaaacggcttttaagacttatgggggtgcctgtgattgatgctccttctgaagca
gaggctcaatgtgctgcactctgcaaatctggaaaggtttatgctgtggcttctgaggac
atggactctttaacctttggaactcctaaatttcttagacacttaatggaccctagctca
agaaaagttccagtcatggagtttgatgttgcaaaggttttggaagagctgaatcttaca
atggatcaattcattgacttgtgcattctttccggatgtgattattgtgacagtattcga
ggtattgggggacagacagctttaaagctaattcgtcaacatggatctatagaggaaata
cttcagaacataaacaaagagaggtactcaatacctgatgattggccatatgaagaggct
cgacggctttttaaagaaccattagtctgcatggacgatgagcaacttgagatgaagtgg
agtcctccagatcttgaagggttgattacctttctggtgaatgaaaatggattcaatatt
gacagactgacgaagggagtagagaaaattaaagcagccaagaacaagtcttcacagggc
cgactagagtcctttttcaagccagttgctaacacatctgcaccaattaaacgaaaggaa
atacctgagaagacaggtaaagaaactaatagtaaaaagctcaaggctggtggtggtagg
aaaaagaaatag

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