Gossypium hirsutum (upland cotton): 107916265
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Entry
107916265 CDS
T04793
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107916265
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
107916265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
NBCH_WD40
Beta-prop_WDR41
Beta-prop_EIPR1
TFIIIC_delta
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
107916265
NCBI-ProteinID:
XP_016700920
UniProt:
A0A1U8KEL3
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Position
D10:54210416..54217459
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AA seq
839 aa
AA seq
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MSINNSKTEVKRLFIGAGCNRIVNNVSWGASDLVSFGAQNAVVIFCPKSAQILTTLPGHK
AVVNCTHWLPSNKFAFKAKQLERHYLLSGDADGVIILWELSLADNKWRPALQLPKSHKKG
VTCITGFMVSQTDAIFATSSSDGTVCIWDVVFPTSFGCECKLSCLETLVVGSRPMVTLSL
AQLPGNTGLIALAMGGLDNKIYLYCAERTGKFVRACELKGHTDWIRSLDFSLPIFSGEAD
SVLLVSSSQDKGIRIWKLTFRGSLANTEGTYKRGEIGLASYIEGPVFVAGSFSYQISLES
LLIGHEDWVYSVQWQPPSLAAEEEIGFYQPQSILSASMDKTMMIWQPERKTGIWMNVVTV
GELSHCALGFYGGHWSPDARSILAHGYGGSFHMWKNIGVSSDNWQPQKVPSGHFAAVTDI
AWARCGEYLLSVSHDQTTRIFAPWHNRDPQSYGDSWNEIARPQVHGHDINCAAIIQGKGN
HRFVSGAEEKVARVFEAPLSFLKTLHYATSEQSSFPEDVQADVQVLGANMSALGLSQKPI
YVNATHEIQENLGNDGLDTLESVPDAVPVALTEPPIEDQLAWHTLWPESHKLYGHGNELF
SLCCDHEGKLVASSCKAQSATVAEIWLWQVGSWKAVGRLQSHSLTVTQMEFSHDDNLLLA
VSRDRQFSIFKINRAGNDEIDYKLVARQEAHKRIIWACSWNPFGHEFATGSRDKTVKIWG
VEKTSSVKPLLTLPQFDSSVTALSWVGLDRQRNDGLLAVGMESGLLQIWSLHVERSDDSI
PTPGVATAQIIRLDPFMCHVSAVNRLAWKNPENNEYSTNLQLASCGADHCVRLYEVIVH
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgtctattaacaacagtaaaacagaagtaaagagattgtttataggggctggttgcaac
agaatagtgaacaacgtttcatggggtgcttctgatttggtctcctttggtgcccaaaac
gccgttgttattttctgtcccaagtctgctcagatcttgactacacttccgggtcataag
gcagttgttaattgcactcattggcttccaagtaataagtttgcattcaaagctaaacaa
ttagagcggcattatctactatctggagatgctgatggtgttattatcctatgggaactt
tctcttgctgacaataagtggaggcctgctttacaattgccaaaatcacataagaagggc
gtaacatgcattactggatttatggtttctcaaactgatgcaatatttgccacatcttct
tctgatggcactgtttgcatatgggatgttgtgtttccaacttcttttggctgtgaatgt
aaattatcatgtctggaaactctagttgttggctcaagaccaatggtaacactttcactt
gcacaactgcctggaaatacagggcttatagccctggcaatgggaggattggataacaag
atttatctttattgtgcggagaggaccggaaagtttgtacgcgcttgtgaactaaaaggg
catacggattggatcaggagtttagacttctcgttacctatattcagtggtgaagccgat
agtgttctacttgtaagttcatctcaggacaaaggtatacgcatatggaagttgactttc
cgaggttctctagccaatacagagggtacatataaaagaggtgaaataggtctggcatct
tacattgaaggtcctgtttttgtcgctggctcattctcttaccaaatatctttggaatct
cttctgattggacatgaggattgggtatattcggtacagtggcaaccaccttcactggcg
gctgaggaagagattggcttctatcaacctcaaagcattttgtctgcatcaatggataag
actatgatgatctggcaacctgagaggaaaactggtatttggatgaatgtggtcactgtt
ggggaattaagtcattgtgctttaggcttttatggtggccactggagcccagatgcacgt
tctatcttggcacatgggtatggtggctcattccatatgtggaaaaatattggtgttagc
tcagataattggcaaccacagaaagtaccttctgggcattttgcagcagtgacagatatt
gcttgggcaaggtgtggtgagtacctgctgtcagtaagtcatgatcagacaactcgtatt
tttgctccatggcacaatcgagatcctcagagttatggggactcctggaatgaaattgcc
cgacctcaagtacacgggcatgatattaattgtgcagctatcattcaaggaaaaggaaac
catcgttttgtaagtggagcagaggagaaagttgccagagtgtttgaagcccctttgtcc
ttcttaaagactctgcattatgctacttcagaacaatcaagttttcctgaagatgtccaa
gcagatgttcaggtcctgggtgccaatatgtctgctcttggtctatcacagaaacctata
tatgtaaatgcaactcatgagatccaagagaatctcggaaatgatggtcttgacactctt
gaatctgttcctgatgctgttccagtcgctttaactgaacctcctattgaggatcaactt
gcatggcatacactatggccagaatcacacaaactctatggacatggaaatgaactgttt
tccttatgctgtgatcatgagggaaagcttgttgcttcatcatgtaaggcccaatcagca
acagtagcagaaatatggttatggcaagtgggttcatggaaagctgttggtcgcttgcag
tctcacagcttaacagtcacacagatggagttctctcatgatgacaatcttcttttggca
gtctcaagggatcgccagttctccattttcaaaatcaatagagcaggcaatgatgaaatt
gattacaagcttgtagctcggcaggaggctcataaaagaataatatgggcatgttcgtgg
aacccttttggtcatgaatttgcgacaggttctagggacaagacagtgaagatctggggt
gtggagaaaacatcttcggttaagccacttttaactttaccgcagttcgacagtagtgtc
actgccctgtcttgggttggtcttgaccgacaaagaaatgatgggcttcttgcagtggga
atggagagtgggctccttcaaatttggagccttcatgttgaaagaagtgatgatagcatt
ccaacaccaggtgtggccactgctcagatcatacggcttgatcctttcatgtgtcatgtt
tctgcagttaaccgtttggcgtggaagaaccctgagaacaatgaatatagcacaaacctg
cagcttgcttcttgcggagctgatcattgtgtgaggttgtatgaggtaatcgttcactaa
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