Gossypium hirsutum (upland cotton): 107916315
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Entry
107916315 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase DIS1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107916315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107916315
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107916315
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
107916315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
TerY_C
zf-Di19
Motif
Other DBs
NCBI-GeneID:
107916315
NCBI-ProteinID:
XP_016700999
UniProt:
A0A1U8KJX1
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All DBs
Position
A10:104898878..104902418
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AA seq
304 aa
AA seq
DB search
MASGNPFFDDLRSKPEVIDLPQNEDRLDSESVNEPTQTTTKPNLIVSSNVRELLECPVCL
NAMYPPIHQCLNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSYG
CVGIYPYYSKLKHESQCSYRPYSCPYAGSECTVVGDIPFLVAHLKDDHKVDMHSGSTFNH
RYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSY
SLEVGGNGRKLIWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRI
WKEQ
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgggaatcctttttttgatgacttgcggagcaagcctgaggttattgatctt
ccacagaacgaagaccgtttggatagtgagtccgtgaacgaacctactcaaactacaaca
aaaccgaatttgattgtgtctagcaatgttcgtgaactgttggaatgccctgtttgctta
aatgcgatgtacccaccaattcatcagtgcctaaatgggcacacgttgtgttctggttgc
aagccaagagtgcacaatcggtgccccacatgcagacatgagcttgggaatattagatgt
cttgcattggagaaggtcgctgcatctcttgagcttccctgtaaatatcaaagttatggg
tgcgtaggcatatatccctattacagcaaactaaaacatgagtcccagtgttcatataga
ccatatagttgcccttatgctgggtcagaatgcacagtggttggtgatattccttttctt
gtggctcacctgaaagatgatcacaaagttgacatgcacagtggcagcaccttcaaccat
cgttatgtcaaatcaaatccgcatgaggttgaaaatgctacatggatgttgacggttttc
agttgctttggtcagtacttttgcctgcatttcgaagccttccaacttgggatggctccc
gtttatatagcattcttgcggtttatgggtgatgataatgaggcaaagaactacagctac
agccttgaggtgggtgggaatgggaggaagttgatttggcaaggggttccaagaagcata
cgagacagtcatcgaaaggttcgtgacagtttcgacggtctcatcatccaacgcaacatg
gcattgttcttctcgggaggagacagaaaggagttgaagcttagagtaacaggaaggata
tggaaagagcagtga
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