Gossypium hirsutum (upland cotton): 107916405
Help
Entry
107916405 CDS
T04793
Name
(RefSeq) myosin-17
KO
K10357
myosin V
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107916405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107916405
04131 Membrane trafficking [BR:
ghi04131
]
107916405
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107916405
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
107916405
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
107916405
mRNA cycle factors
P-body specific factors
107916405
Membrane trafficking [BR:
ghi04131
]
Others
Actin-binding proteins
Myosins
107916405
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
107916405
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
107916405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
TSC22
nSTAND3
AAA_16
AAA_22
Flp1_like
CCDC113_CCDC96_CC
DUF1664
Motif
Other DBs
NCBI-GeneID:
107916405
NCBI-ProteinID:
XP_016701174
UniProt:
A0A1U8KKD2
LinkDB
All DBs
Position
D10:complement(5661254..5675994)
Genome browser
AA seq
1524 aa
AA seq
DB search
MAGPDNIIIGSHVWVEDPGLAWIDGEVIRINGNEIHVKTPHGKTVVTNISKAFPKDTEAP
PGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQY
KGATFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRS
GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLE
RSRVCQISDPERNYHCFYLLCAAPPEDIERYKLGSPKTFHYLNQSSCYELDGVNDAHEYL
ATRRAMDIVGINDEEQESIFRVVAAILHLGNINFAKGKEIDSSVVKDEKSRFHLNMTAEL
LRCDAQSLEDALIKRVMVTPEEIITRSLDPENAVASRDALAKTVYSRLFDWLVDKINVSI
GQDPNSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKL
SRTDFTISHYAGEVTYQANQFLDKNKDYVVAEHQALLTASECSFVRSLFPPLPEESSKSS
KFSSIGSRFKLQLQSLMETLSATEPHYIRCVKPNNVLKPAIFENFNVIQQLRCGGVLEAI
RISCAGYPTRRTFYDFLNRFGLLAPDVLEGNYDDKVACQLILDKKGLKGYQVGKTKIFLR
AGQMAELDARRAEVLGNAARTIQRQIRTYIARKEFISLRGAAISLQSYLRGNMARKIYDE
LRREAGALNIQKNLRRHIDRKSYLTMRKSAIILQTGLRSMTARNEFRFRKQTKAAIIIQA
HWRCHQAYSYYKSLQKAVLVSQCGWRCRVARRELRKLKMAARETGALKAAKDKLEKRVEE
LTWRLQLEKRLRTDLEEAKAQEIAKLQDALHEMQSQVEEAKSMVIKEREAARKAIEEAPP
VVKETPVIVQDTEKINSLTSEVEKLKALLLAEKQTAKEAKQAHATEQAKNVDLTKKLEDD
GKKVDQLQDSVQRLEEKLSNLESENQVLRQQALSMSPTGRALAARPKTTIFQRTPENGNV
VNEEIKKALPNPQLTETEEKPQKSLNEKQQENQELLIKCISQDLGFSGGKPVAACLIYKC
LLHWRSFEVERTSIFDRIIQTIGASIEVADNNDLLSYWLSNSSTLLLLLQRTLKASGAAS
LTPQRRRSTSASLFGRMSQGLRGSPQTAGFSFLNGRLLGGLDDLRQVEAKYPALLFKQQL
TAFLEKIYGMIRDNLKKEISPVLASCIQAPRTSRASLGKGRSQANAVAQQALIAHWQSIV
KTLNNYLKTMRANYVPSFLICKVFTQTFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAE
LEQWCHDATEEFAGSAWDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRIS
TMYWDDKYGTHSVSSDVIASMRVKMTEDSNNAVSSSFLLDDDSSIPFSMDDISKSMQQTE
VAEIDPPPLLRGHSGFSFLLQHTE
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atggctggcccagataacataattataggttctcatgtatgggttgaagatcctggctta
gcatggattgatggagaagttattcgtatcaatggaaatgagattcatgttaaaacccca
catggaaaaactgttgtcacaaatatatcaaaagcttttccaaaagatacagaagcacca
cctggtggagtagatgacatgacgaagctttcatatttgcacgaacctggagttttgcaa
aacttggctacaagatatgaacttaatgagatctatacgtacaccggcaatatcctgatc
gcagtaaatccatttcaaagattacctcatctctatgatactcatatgatggaacaatat
aaaggagctacttttggagaactaagtccccatgtttttgcagttggtgatgctgcatat
agggcaatgattaatgaaggcaaaagcaattctattctggttagtggagaaagtggtgct
ggtaaaactgagaccacaaaaatgctcatgagatatcttgcattcttgggtgggcgatct
ggagtagaagggcgcacagttgaacagcaagttttggagtccaatccagttcttgaagca
tttggcaatgctaagacggttaggaacaacaattcaagtcgttttggtaaatttgttgaa
atccaatttgacaagaatggaaggatatctggggcagcaatcagaacctatttgcttgaa
agatctcgtgtttgccaaatctctgatcctgagaggaactaccactgcttttaccttctg
tgtgctgcaccacctgaggatattgaaagatataagttgggcagcccaaaaactttccat
tatctaaatcaatcaagttgctatgagttggatggtgtaaatgatgctcacgagtatctt
gcaaccagaagggctatggatattgttggaatcaatgacgaagaacaggagtcaattttt
agagtagttgctgcgattcttcaccttgggaacattaattttgccaagggaaaggaaata
gattcctcagtcgtcaaggatgaaaagtctagattccaccttaatatgaccgccgaactt
cttaggtgtgatgcccagagcttggaagatgccctcatcaaacgtgtcatggtaactcca
gaagaaattatcacaagaagccttgaccctgagaatgcagttgccagcagggatgctttg
gccaaaacagtatattctcggttatttgactggcttgtggataaaattaatgtgtcgatt
ggacaggatccaaactcaaagtcaataattggagttcttgatatttatggttttgaaagt
tttaagtgtaatagctttgaacagttttgcatcaacttcacgaatgaaaagctgcagcaa
catttcaatcagcatgtattcaagatggagcaggaagaatatacaaaagaagaaattaat
tggagctacatcgagtttgttgataatcaagatgtcttggacctaattgaaaagaagcct
ggaggaataattgcgcttttagatgaagcctgcatgttccccaagtctactcatgagact
tttgcacagaagttgtaccagactttcaaaaataataagcgttttatcaaaccaaagctt
tcccgtactgattttactatctcacactatgcaggggaggtgacctatcaagcaaatcag
tttctggacaaaaacaaagattatgttgtggctgagcatcaagctctgttgactgcatca
gagtgttcttttgtgagaagtctttttcctccacttccagaagaatcatcaaagtcatca
aaattttcttccattggatcgcgcttcaagctacaacttcaatctctgatggagaccttg
agtgctacagaacctcactacattagatgtgtgaaaccaaataatgtcctgaagcctgct
atttttgagaatttcaatgtcattcaacaattacgctgtggtggtgttcttgaagcaatt
aggatcagctgtgctggatatcctaccagacgtacattttacgattttctcaatcgtttt
ggtctacttgctccagatgttttggaaggaaattacgatgataaggttgcttgtcaactg
atacttgataagaagggactgaaaggatatcaggtggggaagacaaagattttccttaga
gcaggtcagatggcagagttggatgctaggagagcagaggtgcttggaaatgcagccagg
accattcagcgacagattcgtacatatattgctcgcaaggaattcatctcattacgtggg
gctgctatcagtctgcagtcttatttgagaggtaatatggcacgcaaaatatatgatgag
ctgaggagagaagctggagctttgaatattcagaagaatttgcgccgacacattgacaga
aaatcctatttgacaatgaggaaatctgcaattatattgcagacgggattaaggtcgatg
actgctcgtaatgagtttaggttcaggaagcagactaaagctgccattatcatacaggct
cactggcgttgccaccaagcttattcttattataagagtcttcagaaggctgtattagtt
tcacagtgtggctggaggtgcagagttgctagaagagagctcagaaagctcaaaatggct
gcaagagaaactggagctttgaaggcggcaaaggacaagctagagaagcgggtggaggaa
cttacatggcgtttgcaacttgaaaagcgattgaggactgatcttgaggaggcaaaagct
caagaaattgcaaaattgcaagatgcactgcatgaaatgcaatcacaagtggaagaagct
aaatctatggttatcaaggaaagagaggcagcacgaaaagccattgaggaagcacctcct
gttgtcaaagaaactcctgttattgttcaagatacagaaaagataaattcgttgacatct
gaagttgagaagttgaaggctttgctactggctgaaaagcaaacagctaaggaggcaaag
caagctcatgccactgagcaggccaaaaatgtggatctgactaagaagcttgaagatgat
gggaagaaagtagatcagcttcaagattcagtgcagaggctagaagagaagctctctaat
ttagaatcagagaatcaggtactccgtcaacaagcactctctatgtcaccaacaggcaga
gctttggcagcgagacccaagacgacaatttttcagagaactcctgagaatggtaatgtt
gtgaatgaagaaataaagaaagcgctaccaaatccacagttaactgagactgaggagaag
ccccaaaagtctcttaatgaaaagcaacaggagaatcaggagcttctaataaagtgtatt
tctcaagatttaggattctccgggggcaagccagttgctgcttgcctaatatataaatgc
ctgctccattggagatcatttgaagttgaaagaacaagtatttttgatcgaataattcaa
accataggggcatcaatagaggtggcggataataatgacttgttatcctattggttatca
aattcatccactctactattgctgctgcaacgcacgctcaaagcaagtggtgcagcaagc
ctaactcctcaaaggcgaagatcaacttcagcttctctatttggaaggatgtctcaagga
cttcgaggttctccacaaactgctggtttctcatttcttaatggccggctgcttggtggt
cttgatgacctacgacaagtcgaagcaaaatatccagctttgcttttcaaacagcaactg
acagccttccttgagaagatatatggaatgataagggacaatttgaaaaaggagatatct
ccagtgcttgcatcatgtattcaggcacccagaacttcccgggctagcctaggtaaggga
cgttctcaagctaatgctgtggctcaacaagctcttattgcgcactggcaaagcatagtg
aaaactttaaacaattacttgaagacaatgagggccaattatgttccttcattcttaatt
tgcaaagtgttcactcagacattttcattcattaatgttcaattgtttaatagccttctt
ttgcggcgtgaatgttgctcattcagcaatggggagtacgttaaagctgggctagctgag
ctggaacaatggtgccatgatgcaactgaggagtttgcaggctcagcttgggatgagctg
aggcatattagacaagcagttggcttcctggtcatacaccagaagcccaaaaagaccttg
aaagagataaccaatgatctttgccctgtgcttagcatacagcagctgtacaggataagt
acaatgtactgggatgacaaatatggtacacacagtgtatcttcagatgtaattgcgagt
atgagagttaagatgactgaggactccaacaatgctgtcagcagttcatttttactggat
gatgattcaagcattccattctctatggatgatatctccaagtcaatgcaacaaacagag
gtggctgaaatcgatccaccacctctgcttcgtggacactctggtttctcgttcttgtta
cagcatacggaatga
DBGET
integrated database retrieval system
