Gossypium hirsutum (upland cotton): 107916462
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Entry
107916462 CDS
T04793
Name
(RefSeq) auxin response factor 6
KO
K14486
auxin response factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107916462
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
PB1
Motif
Other DBs
NCBI-GeneID:
107916462
NCBI-ProteinID:
XP_016701256
UniProt:
A0A1U8KFE0
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Position
D10:complement(4150649..4158095)
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AA seq
907 aa
AA seq
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MRLSSAGFNPPNQEDTAGEKRVLNSELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAATT
NKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKEAYLPAELG
TPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEW
KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPS
SVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVITLSKYVKAVYHTRVSVGMR
FRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIE
PLTTFPMYPSPFPLRLKRPWPPGLPSFHGLKDDDLGMSSLMWLQGDAGRGMQHLNFQGIG
VSPWMQSRLDASMLGLQTDMYQAMAAAALQEMRTVDPSRSGTASLQFQQPQNGPCRPAAL
MQPQMLQQTLPQAILQGVEDNQHQSQPHLLQQQLQHQNSFNNQQQHQQQPLFNNQQQQQP
QHSMSQQHQQLVDHQQIPSPVSAMSQYASASQSQSSPLQSIPSLGQQQSFSDSNGNPVTS
PVVSPLHSLLGSFPQDESSNLLNLPRTNPIMTTSAWPSKRVAVDVLSSGSPQCVLPQVEQ
LGPSQTNMSQNSISLPPFPGRECSIDQGGTDPQSHLLFGVNIEPSSVLMQNGMSGLRGVG
TDSDSTSIPFFSNYMSTAGNDFSVNPAMTPSSCIDESGFLQSQENVGQSNPQTRTFVKVY
KSGSFGRSLDISAFSNYNELRSELAHMFGLEGQLEDPLRSGWQLVFVDRENDVLLLGDDP
WPEFVNSVWCIKILSPQEVQQMGKRGLELLNSVPVQRLSNGSCDDYVSRQDSRNLSSGIA
SVGSLDY
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgagactttcttctgctggtttcaatccaccaaaccaggaagacactgcaggagaaaag
agggtcctcaactctgaactgtggcatgcgtgtgctggacctcttgtttctctaccacat
gttggaagtagggttgtttatttcccacagggtcatagtgagcaggtagctgcaacaacc
aacaaggaagtggatgcccacatacctaactacccaagcttacctccacaacttatttgt
cagcttcataatgttaccatgcatgctgatgtcgaaacagatgaagtatatgcacagatg
accttgcaaccgttgagtccgcaagaacaaaaggaggcttatctacctgcggaattgggc
actcccagcaaacagccaacaaactatttctgcaaaacattaacagccagtgacacaagc
actcatggagggttttctgttcctcgccgagcagctgaaaaagtgtttcctccactggac
ttcacccagcagcctccagctcaagagttaatcgcaagagacttgcatgataatgaatgg
aaatttaggcatatatttcggggccagcccaaaaggcacctcttgacgactggatggagt
gtctttgtaagtgctaaaagactagttgcaggtgattcagtgctttttatatggaatgat
aaaaatcaattacttcttggcatccggcgagctaatcgacctcaaactgtaatgccttca
tcagtgctatcaagtgatagcatgcatttagggcttcttgctgccgctgctcatgcagct
gcaacaaatagtcggttcactatattttataatccaagggctagtccatcagaatttgtc
ataactctctcaaaatatgtcaaagctgtctatcatactcgagtttctgttggaatgcgc
tttaggatgctgtttgaaacagaagaatccagtgttcgtcgatacatggggacgataact
ggcataagtgacttagatcctgttcggtggccaaattcacattggagatcagtcaaggtt
ggctgggatgaatcaacagctggtgaaaggcagccaagagtttccttatgggaaattgaa
ccattgacaacattcccaatgtatccatctccatttcctttaaggctcaagcgcccatgg
cctccaggattaccttctttccatggcctcaaggatgatgatctaggcatgagttcactt
atgtggctacaaggagatgctggtcgaggaatgcagcatctaaattttcagggtattgga
gtttcaccatggatgcagtcgaggctagatgcctccatgcttggtttgcagactgacatg
taccaagctatggctgctgcagcattgcaagagatgagaactgtggatccttccagatct
ggaactgcttcccttcaattccagcaaccccaaaatggcccttgcaggcctgctgctcta
atgcaaccccagatgttgcagcagactctgcctcaggccattcttcagggtgttgaagac
aaccagcatcagtctcagccacatctacttcagcaacaattgcagcaccagaattcattt
aataaccaacagcaacaccagcagcagcctttgtttaacaaccaacagcaacagcagcca
cagcattcaatgtcccagcagcaccagcaactggttgatcatcagcagattcctagtcca
gtgtctgccatgtcacagtatgcttcagcctctcaatctcagtcatcaccgttgcaatcc
ataccttcactaggccaacaacagagtttttctgattcaaacgggaaccctgtgaccagc
cctgttgtttctcctttacatagtcttttgggttctttcccccaagatgagtcttccaat
ctgctcaacttgcctagaactaaccccataatgactacttctgcatggccatctaagcgg
gttgccgttgacgttctctcatctggatctccacagtgtgttctaccacaggtggaacag
ttggggccttcccagacaaacatgtctcaaaattctatttcgttgccaccttttcctggt
agggagtgctcgatagaccaggggggtaccgacccacagagccatctcttatttggtgtt
aatatagagccttcatctgttctaatgcaaaatggaatgtcaggacttaggggagttggc
actgatagtgattccacttctatacccttcttttctaattatatgagtactgcagggaat
gatttttcggttaatccagcaatgacaccttccagttgcattgatgaatctggattcttg
cagtctcaggaaaatgtgggccaatcaaacccacaaactagaacctttgttaaggtttat
aaatcagggtccttcgggagatcattggatatttctgcattcagcaactacaatgaactt
cgcagtgaactggcacatatgtttggccttgaaggccagttggaggaccctctgagatca
ggctggcagcttgtatttgttgaccgggagaatgatgttcttctccttggcgatgacccc
tggccggagttcgtgaacagtgtctggtgtatcaagatactttccccacaggaagtgcag
caaatgggcaaacgaggcctggagcttctaaactctgtgccagttcagaggctctctaat
ggcagttgtgatgactatgtgagccggcaggactcgagaaatcttagctctggtatcgcc
tccgtgggttctttggactactga
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